Salvelinus namaycush (lake trout): 120021441
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Entry
120021441 CDS
T07522
Symbol
bbs1
Name
(RefSeq) Bardet-Biedl syndrome 1 protein isoform X1
KO
K16746
Bardet-Biedl syndrome 1 protein
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
snh03037
]
120021441 (bbs1)
Cilium and associated proteins [BR:
snh03037
]
Primary cilia and associated proteins
BBSome
120021441 (bbs1)
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Gene cluster
GFIT
Motif
Pfam:
BBS1
GAE_BBS1
PHTB1_N
Motif
Other DBs
NCBI-GeneID:
120021441
NCBI-ProteinID:
XP_038821134
UniProt:
A0A8U0PC59
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Position
Sna26:complement(32258313..32269009)
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AA seq
586 aa
AA seq
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MSSVSQMKENSESSKWLDAHYDPVANLYTFSSCIALADLHGDGENKLVVGDLGTGSCNMK
LKVYRGTGLMSENTLLDLPTGLVSFLMDQHEPRTPAIAVASGPFIYVYKNLRPYFKFTLP
PLEVNALEQDVWNQAREDMIDPLSLKEMLEGIRDKADVPLSVRSLRFLMLDPQDTEAFVN
LHKAQPIQRQTVITCIGTLKKNMADEDAVSCLVIGTESKDVYILDPEAFTILSKMSVPSA
PTQMDVTGQFDVEFRITVACRNGNIYILRRDSPKPKYCIELSSHPVGLVRMGKSVVVGCA
QETLQGFTQKGKKLWTACLPAPVTTMGVMDLPTRGFQAVLVGLANCEVHLYRDKNLISTI
KTPDVVTSICFGRYGREDGTLIMTTKGGGLIVKILKRTAVFDDRDSAPGPPLAQSIRLNI
PKKTKLYVDQTMRERENAVAMHRAFQMDLSRLRLAAARAYVKALESSLTPMSSSLSEPLK
MNAVVQGLGPSFKLTLNIQNTAACRPVMNLAISFLYDESLYSMKTAFFKIPLLVPGLNYP
IDTFVECLSDKGISDIIKVFVLREGKSAPLLTAHINMPVSEGLALN
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagtctcacagatgaaagaaaactctgagagcagtaaatggttagatgcacac
tacgatccagtggccaatctctatactttttcatcttgcattgctcttgcagacctgcat
ggggatggtgagaataagttggtggtgggggacctgggaactggttcatgcaacatgaag
ctgaaggtgtaccgtggaactggcctgatgagtgagaacacattgctcgatctgcccact
ggcttggtttctttcctcatggaccagcatgagccacgcacgcctgccatcgctgtggct
tccggccccttcatctatgtctataaaaacctgcggccctatttcaagttcactctccct
ccattagaggtcaatgccctggaacaggacgtctggaaccaggcaagggaggacatgatt
gacccattgagcttgaaggaaatgttggagggcatccgagacaaagctgatgttccactc
tccgtcagatctttgaggttcctcatgttggacccacaagacacggaggcttttgtgaac
cttcataaggcgcaaccaatacaaagacagactgttattacatgcatcggcaccctgaag
aagaacatggctgatgaggatgcagtcagctgtctggttattggcactgagagtaaagat
gtctatatcctggaccctgaggccttcaccatcctctccaagatgtccgtccccagtgct
cccactcaaatggatgtgactggtcagtttgatgtggagttccggatcactgtggcctgt
cgcaatgggaatatctacatcctccgcagagactcccccaagcctaagtactgtattgag
ctgtcttctcaccctgtggggctggtgaggatggggaagagtgtggtggtgggatgtgcc
caggagacactgcagggcttcacacagaaggggaagaagctgtggacggcttgcctgcca
gcccctgtcactaccatgggcgtgatggacctccccaccaggggcttccaggcagtgtta
gtgggcctggctaactgtgaggtccacctctacagagacaaaaacctcatcagcaccatc
aagactccggatgtagtgaccagcatttgttttgggagatatggacgagaagacggaacc
cttataatgaccaccaaaggaggtggtctgatagtaaagatcctgaagaggacagctgtg
tttgatgacagggactctgccccaggcccccctctggcacaaagcatccgtctcaatatc
cccaagaagaccaagctgtacgtggaccaaaccatgagggaacgagagaatgctgtggca
atgcacagggccttccagatggacctgagtcgtctgcgtctggctgcagcgagggcatac
gttaaagccctggagtccagccttacacccatgtcctccagcctgtctgagcctctcaag
atgaacgcagtggtgcagggcctgggcccgtccttcaagctaactctgaatatccagaac
acagccgcatgccgccctgtcatgaacttggccatcagctttctgtatgacgagagcctg
tatagtatgaagacagccttcttcaagatccccctactggttcctgggctcaactatcct
attgacacatttgtggagtgcctgagtgataaaggaatctctgacatcattaaagtgttt
gttctgcgagagggcaagagtgcacccctgctgactgcacatatcaacatgcccgtcagt
gagggactggcactcaactga
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