Salvelinus namaycush (lake trout): 120021602
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Entry
120021602 CDS
T07522
Symbol
exosc8
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120021602 (exosc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120021602 (exosc8)
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
120021602 (exosc8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
120021602
NCBI-ProteinID:
XP_038821330
UniProt:
A0A8U0TMB0
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Position
26:complement(39115601..39130289)
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AA seq
277 aa
AA seq
DB search
MAAGFKTAEPLEYHLRFLKENCRSDGRELGEFRTTTLNIGSISTADGSALVKIGNTTVMC
GIKGELANPPVDAPNKGYIVPNVDLPPLCSSRFRPGPPGEQAQAASQFIADVIESSAVIQ
KEDLCIVKGKLCWVLYCDIMCLDYDGNLLEACLIALLAALKNARLPEVTVNKETEAPEVN
LEKRTSLNIHKHPVGASFIVFDDSIMIVDPTAEEESLSTATITVVTDEEERLCALHKPGG
TSLSGEKLQDCISRATTRHREVRKLIDKVIQSAKTPK
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggcggctggattcaaaactgctgagcccttggaataccacctgaggtttctgaaagag
aactgccgttctgatggaagggagctgggtgaattcagaaccacgacattgaatataggt
tctatatccacagcagacggctcagccctggtgaagattggaaacaccacagtcatgtgt
ggcatcaaaggggaactggcaaacccaccagtggatgcacccaataaaggttacattgta
cccaatgtagacctgccgcctctgtgttcgtcacggttccgtcctggaccacccggggaa
caggctcaggccgccagccagttcatcgctgatgtcatcgagagctctgccgtcatccag
aaagaggacttatgcattgtgaaaggaaagctgtgttgggtcctgtactgtgacatcatg
tgtctggactacgatggcaacttgttggaggcctgtctcatcgccctgctggctgctctt
aagaacgcgcgtctcccagaggtgacagtcaacaaagagacagaggctcctgaggtgaac
ctggagaaaaggacgagtctgaacatccacaaacaccccgtcggggcctctttcattgtg
tttgacgactctataatgattgtcgatcccaccgctgaggaagagagcctgtctacagcc
acaatcacagtggtaacagacgaggaagagcgactctgcgccctccacaagccaggtggt
acatcattatcaggtgagaagcttcaggattgtatcagcagagccacgacgagacacagg
gaggtccgcaaactcatcgacaaagtcatacagagtgccaagacaccgaaataa
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