Salvelinus namaycush (lake trout): 120021661
Help
Entry
120021661 CDS
T07522
Name
(RefSeq) serine/arginine-rich splicing factor 1B-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03040
Spliceosome
snh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120021661
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120021661
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
snh03041
]
120021661
Spliceosome [BR:
snh03041
]
Common components
Common spliceosomal components
SR proteins
120021661
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
120021661
NCBI-ProteinID:
XP_038821407
UniProt:
A0A8U0PBQ1
LinkDB
All DBs
Position
26:43700905..43714598
Genome browser
AA seq
258 aa
AA seq
DB search
MSGDNMSGGGSVVRGPAGNNDCRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGP
PFAFVEFEDPRDADDAVHGRDGYDYDGYRLRVEFPRSGRGGGRGGGGGGRGGGGDGGGGA
PRGRYGPPSRRSEYRVIVSGLPSSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKED
MTYAVRKLDNTKFRSHEGETAYVRVKVDGPRSPSYGRSRSRSRSNGRSNSRSRSFSPPRR
SRPSPRYSPRHSRSRSRT
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgtctggagataatatgtcgggcggcgggagcgtggttcgtggcccagcgggaaacaac
gactgtcggatctacgtgggtaacctgccgcctgatattcgcactaaagacgtggaggat
gtgttttataagtacggggcgatccgagatatcgatctgaaaaaccggaggggaggaccg
ccgttcgctttcgtggaattcgaggaccccagggatgctgatgatgcggtgcacggtcgt
gatggttatgactatgatggttaccgtctccgggtggagttcccccgtagcgggcgtggg
ggagggagagggggtggtggcggcggcaggggtggcggcggcgatggaggaggaggggcc
ccaagaggacgatacggacctccctcacggcgctcagagtacagggtcatcgtctcaggt
ctcccctctagtggtagctggcaggacctaaaggaccacatgcgcgaggcaggtgatgta
tgttatgctgacgtgttccgggacggtaccggcgtggtggagttcgtacgcaaggaggac
atgacctacgctgtccgcaagctggacaacaccaagttccgctcccacgagggagagact
gcgtacgttcgtgtgaaggtggacggacctcgcagccccagttacggacgctcccgctct
cgtagccgtagcaacgggcgcagcaacagccgctcgcgcagcttctcgccgccgcgacgc
agccggccttcgccacgctactcgccacgacactcccgatcacgctcccgcacctag
DBGET
integrated database retrieval system
