Salvelinus namaycush (lake trout): 120021675
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Entry
120021675 CDS
T07522
Symbol
zgc:113307
Name
(RefSeq) lumican
KO
K08122
lumican
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
snh00535
]
120021675 (zgc:113307)
Proteoglycans [BR:
snh00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
120021675 (zgc:113307)
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Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRRNT
Motif
Other DBs
NCBI-GeneID:
120021675
NCBI-ProteinID:
XP_038821430
UniProt:
A0A8U0PAR7
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Position
Sna2:40327109..40340583
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AA seq
376 aa
AA seq
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MAVQVSVLSLVLSLALGLMLSVCRPVCGTPGTFQDLDYGGVPLWINRLLGEPSVFSLRGR
MDRAWYRANNPQSCPDLCDCPIQWPSALYCDHRDLGELPDSMLYNTQYLFLQGNNISSLP
SSSLTNSSGLRWLILDDNRLRTDGLQTSTLQNLTRLQYLFLNHNKLTVVPSGLPRSLRQL
RLAHNLITSISPGTFGNLHNLTILLLQGNRFNVITETDFTGLVSLNLLNLSENLFSSFPS
HLPPSIQQLYLSNNSLSGLGEESLQGFTNLRYLRLSHCGLVSPSLHPQSFNLSSLVELDL
SYNKLTTIPLVPLTLQYLYLEANRIQEFNISSFCREVGPLSYSRMRILRLEGNKMSYHLL
PPEWVYCLRVLHHIYI
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggctgtacaagtgtcggtgctgtccctagtcctcagtctagccctgggcctgatgctg
agtgtctgcaggcctgtgtgtggcaccccagggacattccaggacctggactatggaggg
gttcctctctggatcaaccgtcttctgggggaaccctctgtattcagcctgaggggtcga
atggaccgggcatggtacagagccaacaacccccagtcctgccctgacctgtgtgactgt
cctatccagtggccctcagctctgtactgtgaccacagagacctgggagagctgccggac
agcatgctttacaatacacaatacctgttcctgcagggcaacaacatctcgtccctgccc
tcatcctctctcaccaactcctcaggactccgctggctcatcctggatgataaccgtctg
cggacggacgggctgcagacctccacgctgcagaacctgacccggctccaatacctgttc
ctcaaccacaacaagctgaccgtcgtgccctctggcctgcccaggagcctgcggcagctc
cgactggctcacaacctcatcaccagcatctccccaggaacctttgggaacttacataat
cttacaatactgctactgcaggggaataggttcaacgtgattacagagactgacttcaca
ggcctggtgtctcttaacctgttgaacctgagcgagaacctcttctcctccttcccctcc
caccttcctccctccatccagcagctctacctctccaacaactctctgtctggcctgggg
gaggaaagtctacagggcttcactaatctcaggtacctgcgtctgagccactgtggtcta
gtgagcccttccctccacccccaatccttcaacctgtcttcccttgtggagctggatctc
tcttacaacaagctgacaaccatccccctggttcccctcacactacagtacctatacttg
gaggccaaccgcatacaagagtttaacatctctagtttctgtcgggaggtgggtcctctg
tcgtactccaggatgaggatccttcgtctggagggcaacaagatgtcctatcatctacta
ccacctgaatgggtctactgcctccgagtcctgcaccacatatacatctaa
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