KEGG   Salvelinus namaycush (lake trout): 120021682
Entry
120021682         CDS       T07522                                 
Name
(RefSeq) tRNA pseudouridine synthase A-like isoform X1
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
snh  Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:snh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:snh03016]
    120021682
Enzymes [BR:snh01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     120021682
Transfer RNA biogenesis [BR:snh03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    120021682
 Prokaryotic type
    120021682
SSDB
Motif
Pfam: PseudoU_synth_1 DUF2344
Other DBs
NCBI-GeneID: 120021682
NCBI-ProteinID: XP_038821441
UniProt: A0A8U0P942
LinkDB
Position
Sna26:17413370..17416506
AA seq 422 aa
MQKIRALIGSPRVLSIKSNGWLYKCAGIRWIMSEESGNAQTKPLKRVEEGNGESGENGHI
RKKLKSDVEQTGDERKHPKRKVVLLLAYSGKGYYGMQRNAGSSQFKTIEDELVTALIKSG
CIPDNHGDDMKKMSFQRCARTDKGVSAAGQVVSLKLWMIEDVKEKLNSNLPPQIRVLGLK
RVTGGFNSKNSCDARTYSYMLPTVAFAPKDYSTENSAAFRLEPETLQRVNRLFGSYKGTH
NFHNFTSQKAARDPSARRYITEMTCGEPFVRGGAEFAEITVRGQSFMMHQIRKMIGLVIA
VVKGYSGDEVLKRSWGEEKVDVPKAPGLGLVLEKVHFDRYNKRFGGDGLHECLEWTEEEQ
AILAFKEEHIYPSIVETECQEGSMASWMATLPIHDFEATAKGAQDKDRGQDDDEGNGSDS
AL
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgcagaaaattcgcgccttgataggaagtccacgagtgttgagtatcaaaagcaacggt
tggctttacaagtgtgcagggataaggtggataatgagtgaagagtcagggaatgcgcag
accaagccactgaaacgagtggaggagggaaatggcgagtcgggtgagaatgggcacatc
agaaagaagcttaagtctgatgtagaacagactggggatgagaggaaacaccccaaaaga
aaagtggtcctgcttttggcgtattcaggcaaaggttactacggtatgcagagaaatgct
ggatcttcccagttcaaaaccattgaggatgagctggttacagcactgattaagtctggg
tgcatcccagacaaccatggagatgatatgaaaaaaatgtcattccaaagatgtgcaaga
acggacaagggtgtttctgcagcaggtcaagtggtctctctaaaactatggatgattgaa
gacgtaaaggaaaagctcaactccaatcttccaccacagatcagagtgctgggtctgaaa
cgagtgactgggggcttcaattctaaaaacagctgtgatgcccgcacatactcctacatg
ctccccactgtggccttcgccccaaaagattatagcactgagaattccgctgcattccgc
ctggagccagagacactgcagagagtaaaccgtctgtttggcagctacaagggcactcat
aactttcacaacttcacctcccagaaggccgcgcgggaccccagcgcccgccgctacatc
acagagatgacctgtggcgaaccctttgtgcgtggcggcgctgagtttgctgagattacc
gtgcgtggccagagcttcatgatgcatcaaatccggaaaatgattggcctggtgatagct
gtggtgaagggctattctggggatgaggtgttaaagcgaagctggggcgaggagaaggtg
gatgtgcccaaggcccccgggctgggcctggtgctcgagaaggtgcactttgacaggtac
aacaagcgctttggcggggacggcctccatgagtgcctggagtggactgaagaggagcag
gctatcttggccttcaaggaggaacacatctaccccagcattgtggagactgagtgccag
gaagggtccatggccagctggatggccacactgcccatacacgactttgaggccactgca
aaaggggctcaggataaggacagggggcaggatgatgatgagggtaatggttcagattct
gcactttga

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