Salvelinus namaycush (lake trout): 120021818
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Entry
120021818 CDS
T07522
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3-like
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04010
MAPK signaling pathway
snh04260
Cardiac muscle contraction
snh04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120021818
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
120021818
04261 Adrenergic signaling in cardiomyocytes
120021818
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120021818
Ion channels [BR:
snh04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
120021818
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Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
dCache_1
VWA
VWA_3
VWA_2
MCP-like_PDC_1
VWA_CoxE
dCache_2
Motif
Other DBs
NCBI-GeneID:
120021818
NCBI-ProteinID:
XP_038821599
UniProt:
A0A8U0PD39
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Position
Sna2:complement(43392833..43443620)
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AA seq
1057 aa
AA seq
DB search
MGSQPGIPLSVVKLWASAFGGEIKSISAKYSGSQLLQKKYKEFEKSVRVEEIDGMKVVKT
LAKKMEEMFRMKKEAMRRLVEAAEEAHLQHEEDPELQYEYFNAVLINEVDEEGNNVELGG
EFVLEPNDHFNNLSVNLSLSVVQVPTNMYNKDPAIVNGVYWSEALNKVFVDNFEKDPSLI
WQYFGSAKGFFRQYPGVKWHPDEHGVIAFDCRNRKWYIQAATSPKDVVILVDVSGSMKGL
RLTIARQTVSSILDTLGDDDFFNIIAYNQEMHYVEPCLNGTLVRADRNNKAHFKEHLDKL
FAKGIGLLGDALTEAFTILNDFNQTGHGSVCSQAIMLVTDGATQMYDDVFAKFNWPDRKV
RIFPYLIGRESAFADNMKWMACANKGYFSQISTLADVQENVMRYLHVMSRPKVIDHEHDT
VWTEAYVDSTLSQAHKSRNKKGPSLMTTVAMPVFSTKNETKNQGILLGVVGTDIPLQELM
KIIPKHLLGIHGYAFAITNNGYILTHPDLRPLYQEGQKRRKPNYSSVDLSEVEWEDKDDF
LRNAMVNRKTGTFSMEVKKTVDKGKRLLKMHNDYFYTEVKGTPFSVGVALSRGHGKFFFR
GNVSVEAGLLDLEQPDVALADEWTYCNTDEHHEHRSLSQIQAIKLYLTGRKPHIKCDREL
IQEVLFDAVVTAPLEAYWTGLALNKSENSDKGVEIAYLGTRTGLSRTSLFVVPEHLSNQD
FLTAEDKEGVFNADHFPLWYKRAAEQVPGTFVYSIPFGGNENKSVVLASTAIQLLDDRKS
PIVASVGIQMKLDFFQRKFWTASRQCAALDGKCSISCDNEDIKCYLIDNNGFILVTEDNS
QTGLFFGEVESAVMNKLLLMGSFKRITLYDYQALCREYAGSSDSARSLSHPFSIVKWLLT
KLVIFLLEFNLYSWWHVDLSVKAQRSRGKTMMVPCDTEYPAFVSERTIKETTGNIDCEGC
VRSFVIQQIPSSNLFMVVVDNKCDCSSAPLVSMDPIEIMYNESLKCDRLKFQKDRKRPES
CHPFHPEENAMECGRAAGLSAPLTAALLPLLATLISR
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atggggtcccagccagggattcctctctcagtggtgaagttatgggcctcggcgtttggt
ggagaaattaaatcaatttctgcaaaatactctggatcccagctgctgcagaagaaatat
aaagaatttgagaagtccgtccgagtggaagaaattgatggcatgaaagtggtcaaaact
ctagcaaagaagatggaggaaatgttccggatgaaaaaggaggccatgcggcggctggtg
gaggcagcagaggaggcccatctacagcacgaggaggacccagagctgcagtatgagtac
tttaacgcggtgctgatcaacgaggtggatgaggagggcaacaacgtggagctgggagga
gagttcgttctggaacccaacgaccacttcaacaacctgtcagtcaacctcagcctcagt
gtggtgcaggtgcccaccaacatgtacaacaaagatccagccatagtgaatggggtgtat
tggtcagaggccttgaataaagtgtttgtggataactttgaaaaagacccgtccctgata
tggcagtactttggcagtgccaagggcttctttaggcagtatcccggggtcaaatggcat
ccagacgaacacggggtcatcgccttcgactgcaggaacaggaagtggtacatccaggca
gcgacgtctcctaaagacgtggtgatcctggtggacgttagtggcagtatgaagggcctg
agactgaccatcgccagacagacggtctcctctatactggacacactgggagacgacgac
ttcttcaacatcatcgcttacaatcaggagatgcactacgtggagccttgtctgaacggc
acactggtacgagcagacagaaataataaagctcatttcaaagaacacctggacaagctg
ttcgccaaagggattggtctgctgggtgacgctctgaccgaagcgttcaccattctaaat
gattttaaccagactgggcatggcagtgtgtgtagccaggctatcatgctggtgactgac
ggggcaacgcagatgtacgacgacgtcttcgccaagttcaattggccagacagaaaggta
cgcatattcccttacctgattggccgagagtctgcctttgctgataacatgaaatggatg
gcctgtgctaataaagggtatttcagtcagatctccacactggctgacgtacaggaaaat
gtgatgaggtatcttcatgttatgagtcgtcctaaagtcatcgaccacgagcatgacacg
gtctggacagaggcctacgtggacagcactctctcccaggcacacaagtccagaaacaag
aagggccctagcctgatgaccactgtggccatgcctgtgttcagcaccaagaacgagacg
aagaaccagggtattctcctaggggtagtgggcacagacattcctcttcaggaactcatg
aagatcatccctaaacacctgctgggtatccacggttacgcctttgccatcacaaacaac
ggctacatcctgacccatccggacctgaggccactgtaccaggagggccagaagaggagg
aaacccaactacagcagtgtggacctttcagaagtggagtgggaggacaaggatgacttt
ctgcgtaatgccatggtcaacaggaagactgggacattctccatggaggtgaagaagaca
gtggacaaagggaaaagactcctgaagatgcacaatgactatttctacactgaagtcaag
ggaactcccttcagtgtcggagtggctttgtctagaggccatggaaaattcttcttcaga
ggaaacgtctcagtggaagcagggctccttgacctggaacagccagatgttgcgctggca
gatgaatggacgtattgcaacacagatgagcaccatgagcaccgctccctctcccagatc
caggccattaaactctacctgaccggacgcaagccacacatcaaatgtgacagagagctg
atccaggaggtgttgtttgatgctgtggtcacagccccactggaggcctactggaccggc
ctggccctcaacaagtccgagaactcagacaaaggagtggagattgcttacctaggcaca
cgcactggcctctctagaaccagcctgtttgttgtcccagagcacctatccaatcaagac
ttcctgacggcggaggataaggagggggtgttcaacgctgaccacttccctctgtggtac
aagagagcagcagagcaggttcccggcaccttcgtctactcgatcccctttggaggaaat
gagaataagagcgtggttttggccagcactgccatacaactgctggatgacaggaagtcg
cctattgttgcttccgttgggattcagatgaagctggatttctttcagaggaagttctgg
accgctagtagacagtgtgctgctctggatgggaagtgctccattagctgtgataatgag
gacatcaagtgttaccttatagacaacaacggatttattctggtcacagaggacaactct
cagacggggctgttctttggagaggtggagagtgctgttatgaacaagctgcttctcatg
ggctccttcaaaaggatcactctgtatgactaccaggctctctgtagagagtatgctggc
agcagtgacagcgcacgctctctatcacatcccttctccatcgtgaaatggctcctgacc
aaacttgtcattttcctgctggagttcaacctttacagctggtggcatgttgatctctca
gtcaaagcccaaaggtcgaggggaaagaccatgatggtgccatgtgacacggagtaccct
gccttcgtttctgagcgtaccatcaaagagaccacgggaaacatcgactgtgaggggtgt
gtcagatcttttgtaattcagcagattcccagcagtaatctcttcatggttgtcgtggac
aacaagtgtgactgcagctctgcccccctggtttccatggatcccatcgagattatgtac
aatgagtctctgaaatgtgataggctgaagtttcagaaagacagaaagcggccagaatcg
tgtcatccttttcaccccgaggagaatgccatggagtgtggacgagcagcaggcctctct
gccccccttacagcagcactgctccccctactggccactctcattagcaggtga
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