Salvelinus namaycush (lake trout): 120021849
Help
Entry
120021849 CDS
T07522
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-2-like
KO
K04859
voltage-dependent calcium channel alpha-2/delta-2
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04010
MAPK signaling pathway
snh04260
Cardiac muscle contraction
snh04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120021849
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
120021849
04261 Adrenergic signaling in cardiomyocytes
120021849
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120021849
Ion channels [BR:
snh04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
120021849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
dCache_1
VWA_2
MCP-like_PDC_1
Cache_3-Cache_2
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
120021849
NCBI-ProteinID:
XP_038821626
UniProt:
A0A8U0TN28
LinkDB
All DBs
Position
Sna2:44745997..44789407
Genome browser
AA seq
1034 aa
AA seq
DB search
MLNAIYNEKRRQFSLVKNSPYEMVEKVASDIEKLLAKKRKALDRLASEAERVQRDHPWHD
SVKEWNMTYYDSKAELDYYSLQDGDGETVSPPLQVEFVYDPNFKNKVNYSFTAVQIPTDI
YKGAPVILNELNWTQALEKVFMENSQEDPSLLWQAFGSATGVTRYYPATPWRAPDKIDLY
DVRRRPWYIQGASSPKDMIILVDVSGSVSGLTLKLIKSSVMEMLDTLSDDDYVNVARFNE
KAEAVVPCFKHLVQANVRNKKIFKEAVKLMQAKGTTDYKSGFHFAFNQLLNKTNVPRAHC
NKIIMLFTDGGEDRAQDIFEQYNWPNKTVRVFTFSVGQHNYDVTPLQWIACANKGFYFEI
RSICAIRINTQEYLDVLGRPMVLAGSRAKQVQWTNVYQDALGLGLVFTGTMPVFNLTVDG
NSQNQLILGVMGVDVHLDEIKKLTPRYNLGANGYIYAIDPNGYLLLHPNLHPKLLDLPEP
VTLDFLDAEVEDSSKQEIRKHMIDGRPGDMQIKTLVKSIDERYIDEGVRSYTWTPINGTD
YSLGLVLPPYSEYYIQADLSDVMLQLQYLQSLLPSSFESGGHVFLAPREYCKRLHISDNN
TQFLENFLSLMVEITPESEDCDQGLIHNLILDSGIIWQLASRVWKNKDIQTYGFLALFAA
TDGGVTRVFPNSAAESWDEDPEPFNSNYYRRSLDNKGYMFRAPPRASMDDPVTSENGTIG
ILVSTAVEVNLGGKNLKPAVVGVKLDLEAWVDKFKILASNVSDSRQGSQKCGPSRSCEMD
CEVNTDDLLCYLIDDGGFLVMSNQRDHWKKVGLFFGDVDPYLMHALYNNSIYARRQSFQY
QSACEPVSSSHTGAAPRGIFVPSIADMLSLAWWTSAAAWSVVQQLLYGLAYNTWLYTGDV
LADGFDQKESSCVTIQSQFYFTNTTNSYNVLQDCGNCSRLFHAKRIENTNLLFVVAETLP
CSSCEIERLTQVKTEFQEEDPCEVLNSARYRRGPTECWDYNIWENTSECGRGHSLQSSIG
ILFSIQLILTLLSL
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgttaaatgcaatctacaatgagaaaagaaggcagttcagcctggtaaagaattctcct
tatgagatggtggagaaggtagcttcagacatcgagaagctactggccaagaaacgcaaa
gcacttgataggctggccagtgaagcagaacgtgtccagcgagaccatccatggcacgac
agcgtcaaggaatggaacatgacgtattacgattccaaggcagagctagactattactcc
ctgcaagatggtgatggggaaacagtgagccctccactacaggtggagtttgtgtatgac
cctaacttcaaaaataaggtcaactactccttcacagccgttcagatccccacagacatc
tacaaaggagccccagtgattctaaatgagctgaactggacacaggcgctggagaaggtg
tttatggagaacagtcaagaggatccttcactactctggcaggcatttggtagcgccact
ggggtcacccgctactacccagccacaccatggagggcccctgataagatcgacctttat
gatgtgaggagaaggccatggtacatccaaggggcctcatcccccaaagacatgatcata
ctcgttgatgtgagtggcagtgtgagcggcctcactttgaagctgatcaagtcatcagtg
atggagatgctggacactctgtctgatgacgactatgtcaacgtggccaggtttaatgaa
aaggcagaggcagtggtcccttgcttcaaacacctggtccaggccaacgttcgcaacaag
aagatcttcaaagaggctgtaaagctcatgcaagctaaaggcaccacagactacaagtct
ggtttccactttgccttcaatcagctactaaacaagaccaatgtcccgcgagctcactgc
aataaaataatcatgctgttcactgatggaggagaggatcgagctcaggacatctttgag
cagtacaactggcccaacaaaacggtgcgggtctttacattctctgtggggcagcacaac
tatgatgtcacacccttgcaatggatagcgtgtgccaataaaggtttctattttgagatc
cgctccatctgtgccataaggattaacacccaggagtacctggatgtgctgggccgcccc
atggtcctggcaggcagccgtgccaagcaggttcagtggaccaatgtctatcaggatgcc
ttgggtctgggactggtttttactggaaccatgcctgtttttaatctcaccgtggatgga
aactcacagaatcagctcatattaggtgtcatgggggtggacgtgcatctggacgaaatc
aaaaagctgacaccacgatacaaccttggagccaatgggtacatatacgccatcgaccca
aatggataccttctcctgcatccaaaccttcacccaaagctgctcgacctaccagagcct
gtaacacttgacttcctggatgctgaggtggaggacagctccaaacaggaaatccgcaaa
catatgattgatggcaggccgggtgacatgcagattaagacgcttgtaaaatcaattgat
gagcgatacatagatgagggagttcggagttacacctggacacccatcaatggtacagac
tacagtctgggcctggtactgccgccctacagtgaatactacatccaggcagacctgagt
gatgtgatgctgcagctccagtatctgcaatctttgctgcccagctcctttgaatcaggg
ggacacgtgttcctggctcccagggaatactgcaagcgtctgcacatctctgacaacaac
acacagttcctggagaacttcctgtctctcatggtggagatcacaccagaatctgaagac
tgtgatcaaggcctcattcacaacctgatcttggattctggaatcatctggcagttagca
tctagagtgtggaagaacaaggatatccaaacgtatggtttcctggcattatttgcagcc
acagacggaggtgtaacccgggtcttccccaactcggctgctgagtcgtgggatgaggac
cctgagcccttcaactccaactactaccgccgcagccttgacaacaagggctatatgttc
agagctccacccagagcctccatggatgatccggtgacctcggagaatggcaccatcgga
atcctggtcagcactgccgtggaagtcaacctgggaggcaagaacctgaaaccggcagtt
gtgggggtgaagctagacttggaagcatgggtagacaagttcaagatcttggccagcaac
gtgtctgacagtcgtcagggctcgcaaaagtgtgggccgtccagaagttgtgagatggac
tgcgaagtcaacactgacgacttactctgctatctgattgacgatgggggcttcctggtg
atgtccaaccagagggatcactggaaaaaggtgggccttttctttggtgatgtggacccc
tatcttatgcacgcgctgtataacaactccatctatgcccgccggcagtcctttcagtac
cagtcagcatgtgagccagtcagcagcagccacacaggggcagcacccaggggcatcttt
gtgccctccatcgcagacatgctcagtctggcctggtggacatcggcggcagcatggtct
gtagtccagcagctgctctatggactggcctacaacacttggctctacacaggtgatgtt
ctggcagatgggtttgaccagaaggagagcagctgtgtgaccatccaaagccagttctac
ttcaccaacaccaccaactcatacaatgtgctgcaggactgcgggaactgctccaggtta
tttcatgctaagaggatagagaacaccaacctgttgtttgtggtggctgagacactgccc
tgtagctcctgtgagatcgagagactgacccaggtcaaaacagagttccaggaggaggat
ccctgtgaggtgttgaactctgcacgctaccggagaggcccgaccgaatgctgggactac
aacatctgggagaacacatcggagtgtgggagaggccattccctacaatcttcaatagga
atccttttctctatccagctgatcctgactcttctctctctctga
DBGET
integrated database retrieval system
