Salvelinus namaycush (lake trout): 120021853
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Entry
120021853 CDS
T07522
Name
(RefSeq) rho guanine nucleotide exchange factor 28-like
KO
K21072
A-kinase anchor protein 28
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120021853
Membrane trafficking [BR:
snh04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
120021853
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
PH
SOS1_NGEF_PH
PH_13
Motif
Other DBs
NCBI-GeneID:
120021853
NCBI-ProteinID:
XP_038821627
UniProt:
A0A8U0PB20
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Position
Sna26:5934267..6003206
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AA seq
1704 aa
AA seq
DB search
MLAAEGAWNPEALFTSEEGKDELAAPELPTDLDSRIDGRLWERRREKRLIVVPIAHSRIP
PSEVPGVYVPERIRAYPSSSKSLRRLPIYLIPSRCSSVPDLEPEQTEFYVVLEGSRLAHV
TVGKRTEDGKSLCFTVPGHDLQETVSVTVYCHTEGRAKPCGGGASLDYVCDLPQEVAEYL
LANSDCLSPQSHLEVLRRVSAAPGEGNTEGDRSAGSGEHDLGKTDQEDGYGGGRPRPDPE
VECRLREMDEKITQAVANLDYPLEWSGKASQPREEHQPRDTLLHLSVRLGLLCLSRFLIG
QPRGQRALTLPNEEGATPLQLAQNGGDHTLFMALTTPPVPQRSPPVGVCCVWADRTCVLR
VCPGSGTLNLTFLGGPESSVLDNILVLREKLTDHNILRQISALRGDVDVQMEDSDRVDVH
TSDTSDGVKSQSSHSAVADKSASMINGRSQLSTEVDDLKAKVSVAGITRDSSVTDSRVWD
TVDSEVLLQQATVTPPPFGLEEQQSPFISSSPLSSPADRALARVNSLSHSYLTNQRGSPP
LESPNLSPSLVALVIDSEEEGVLEKSPFSPLTFDPRSSGDDASPDLTCTRTHSASSAGDP
TPTKDMGDQKIRHRSYSYSSPKISLLPSRFSRDTSAQPATSDLSPAGSCSVSSSTERREL
SLSKQPQDKRIEEEEWDKYNIPSKVASEKYKMIRTFSFLKSRMSSTRNKNKGKEKEREKE
KDRQQNGHRFSTGSCAGPTVCLVCDKPATGKELLHCSMRDSPSSCLIATSASLPMMSQRD
RRETASLPNPLSRSVPYAADRLSESPEVESDRRWGPGRSEELLQTTESSSSTDSSLGEDC
VDTGLHSDLAADALDYEAESWSLTVEHKFCKKQDKRVVKRQDVVYELMQTEMHHLQTLCI
MAEVFRRGMREEVQLDAGAVGRVFPCLDELLLLHHDLFNSMRERRHSSAQPYGNRNYVIE
RIGDALLQQFSEENAERMKQVYGDFCSHHTEAVTFFKELQQHNKRFQTFIKQQSNNYLVR
RREIPECILLVTQRITKYPVLLERILQYTQEDSEEHRDLSRALVLIKEVIAAVDLRVSEF
EQGQRLQDVLNRMDNRSVAKLKNGHTFRKQDVLVPGRTLKHQGLLLWKTATGRLKDVLAL
LLTDTLIFLQEKDQKFIFAAVDQKPPVISLQKLIVREVANEERGMFLISASAAGPEMYEV
HTSSKDRRNTWMRHIREAVESCPEDEEENTSESEEERRASEARAQKIQRLQESLSSQDHQ
ICSTLEEKLQIYAELSTLRGATQEPHLEPRLLVQPQPEEVPRAAVLLTAALREAENLRTT
LSSRTCSPSSLCSPHRDPLSNPVSSANPPTPMDTPTDGKASHGDPDTRDGEWSASQALVL
QSLTQPHTGDTNNINLKVTQSVQSLTQLLYSLQAAVTIQDSFYEVQKLLLRESDRSGPCP
PRPHPPCLQEQEKHRNQEKRREEVAAAVRLQGQLRQERQRWERECQMRHSQQGELESRLE
ERERRCHLEAERLKQEWEELEEQLGEYQQSLERLREGQRSVGKERERLETQQKLLQSWRH
SRQRSLPVMVIPLDGHQDSLPGQSGVHLDNAGSVFVNEAAFTTSKVLNNRHVHHHMQQHQ
RGGSLGYGDDPRAHNSLNTILARSSQRHTLQPLSLSKAPTLHPETNTPQCWAGGAGVTGY
LYTTSGRQGTEHTTNGKTQLSKVV
NT seq
5115 nt
NT seq
+upstream
nt +downstream
nt
atgctagcagcggagggtgcctggaaccctgaagcgctgttcacctcggaggaaggaaag
gacgagcttgcagccccggaactaccgacggatcttgactcacggatcgatggacggcta
tgggaacgcagaagggagaagaggttgattgtggtcccaatcgctcattcaaggatccca
ccttcagaagtccccggcgtctacgtccccgagaggatccgagcttacccgagttcttcc
aagagcctccgaagactgccgatttatctcatcccgagccgatgcagctcggttccagat
ctagaaccagaacagacagagttctatgtggttttagaaggttccagactagcccatgtt
actgtagggaagagaacagaggatggaaagtctctgtgcttcactgttccaggtcatgac
cttcaggagactgtctctgtcacagtgtattgccacacagagggcagagccaagccctgt
ggaggcggggcctcgctggactacgtctgtgatttgccacaggaagtggccgagtacctg
ctagccaatagcgactgtctgagtccccagagccacctggaggtcctgaggagggtttca
gcagctccaggggaggggaacacggagggtgacaggagtgctggctcaggagagcacgat
ctggggaagacagaccaggaggatgggtatgggggtgggagacccagacctgatccagag
gtggagtgtcgtctcagggagatggatgagaagataacccaggccgtggccaacctggac
taccctctggagtggagcggcaaggccagccaacctagagaagagcaccagcccagagac
actctcctccacctctccgtgcgtctgggtttgctctgtctctcccgcttcctgattggc
cagcccaggggtcagagggcactgacacttccaaatgaggagggggccacacccctccag
ctggctcagaacggaggagaccacaccctctttatggcacttaccaccccccctgtccca
cagaggtctccccctgtcggggtgtgctgtgtgtgggcagataggacttgtgtgctaagg
gtatgtcctgggtctggcacccttaaccttaccttcctggggggccctgagagcagtgtt
ctggacaacatcctggttctcagagagaaactgacggaccacaatatcctcagacagatc
tcagcactgagaggtgatgttgatgttcagatggaggacagtgacagagtggatgtccat
acaagtgataccagtgacggagtgaagtcccagtcctcccactctgctgtggcagacaaa
tcagcctccatgatcaatggcaggagtcagctctccacagaggtggatgacctcaaggcc
aaggttagtgttgccgggataacgagggacagctctgtgactgacagcagggtgtgggac
acagtggactcagaggtcctcctccaacaggccaccgtcacccctcctcccttcggacta
gaggagcaacagtcccccttcatctcttcttctcccttgtcctcccctgctgaccgagcc
ctcgcccgagtgaacagcctttcccactcatacctaaccaatcagagagggagcccacct
ctggagtcacctaacctcagccccagtctggtagctctagtgattgacagtgaggaggag
ggggttctggagaagtctcccttctctcctcttacctttgaccctcgtagcagcggggac
gacgcctccccagacctcacctgcacacgcacacactctgcctcctcggccggtgacccc
acccccacaaaggatatgggcgaccagaagatcagacaccgctcctactcctactcctcc
cccaagatcagcctgctgccctcccgcttctcccgtgacacctcagcccagcctgcgaca
tctgacctcagcccagcgggttcatgttctgtctcatcctccacagaacggagagagctc
agcctatcaaagcaacctcaagataaaagaattgaagaagaggagtgggacaagtacaac
atcccttccaaggtggcgtcagagaaatacaaaatgattcgtaccttcagcttcctcaag
agccggatgtcgagcacacgcaacaagaacaaggggaaggagaaggaaagggagaaagag
aaggacaggcagcagaatggacatcgcttctccacggggtcctgtgctggacccactgtc
tgtctggtctgtgacaaacctgccactggcaaggaacttctgcactgctccatgcgagac
agtccctcttcatgtctgatcgccacctcagcctctctacctatgatgagccagagggac
aggagggaaacagcctcgctccccaaccccctctccaggagcgtcccctatgccgctgac
aggcttagcgagagtccggaagtggagtctgacaggagatggggtcctggccgatcagag
gagctcctacagaccacggagtcgtcctcctccactgactcctccctcggagaagactgt
gtggacaccggtctccacagcgacctggctgctgatgctctggactacgaggctgagtct
tggagtctgacggtggaacacaagttttgtaagaagcaggacaaacgggtggtcaagaga
caggacgtcgtctatgagttgatgcagacagagatgcaccacctccagactctgtgcatc
atggctgaggtcttccggcgagggatgagggaggaggtccagctggacgccggcgccgtg
gggcgtgtcttcccctgtttggacgaactcctcctcctccaccacgacctcttcaactcc
atgagggaacgccgccacagctccgcccagccatacgggaacaggaactacgtcatagaa
cgcatcggagacgctctgctgcaacagttttctgaagagaacgcagagaggatgaaacag
gtgtatggagacttttgcagccatcacactgaggcagtcaccttcttcaaagagctacag
caacacaacaaacgatttcagaccttcatcaagcaacaaagtaataactatttggtgcgg
aggagagagatcccagaatgcatcttgttggtgacccagaggataactaagtaccctgtt
ctgttggagaggattctacagtacacccaggaggacagtgaggagcacagggacctctcc
agagctctggttttgatcaaggaggtgatcgcagctgtagacctgagggtcagtgagttt
gagcagggtcagaggttacaggatgtcctaaaccggatggacaaccgtagtgttgccaag
ctgaagaacggacacacctttaggaagcaggatgttctggtgccaggccggaccctcaaa
caccagggcctgttactgtggaagaccgccaccggacgactcaaagatgtcttggctctc
cttctcacagacacactgatcttcctacaggagaaagaccagaagttcatattcgctgct
gtggaccagaagcccccagtgatctctctgcagaagctgattgtcagagaggtagccaat
gaggagagagggatgtttctgatcagtgcatcggctgcgggtccagagatgtacgaggtc
cacacctcctcgaaagaccgacgcaacacctggatgaggcacatccgagaggctgtggag
agctgtccagaggatgaggaggagaacactagcgaatcagaggaggagagaagagcatct
gaagccagagcccagaagatacaaagactacaggagagcctgtccagtcaggaccatcag
atatgttccactctggaggagaagctacagatctatgctgaactgtccaccttgaggggt
gccacccaggaaccacaccttgagccacgcttactggtccagccgcagccagaggaggtt
ccccgggctgcagtactgctcactgccgcgctccgagaggctgagaacctgaggaccact
ctgtcctccaggacctgttctccctccagcctctgcagccctcacagggaccccctgtcc
aaccctgtgtcctcagccaaccctcctacccccatggacacccccacagacggcaaagcc
tcacatggggaccctgataccagggacggggagtggtcagcctcccaggcccttgtactg
cagtccctgactcaaccccacactggggacactaataatatcaaccttaaggtgactcag
agtgtccagagcttgacccagttactctacagtctgcaggcagcggtaaccatccaagac
agtttctacgaggtacagaagctcctcctccgtgagagtgaccgctccggcccctgcccg
ccaagaccacaccccccgtgtctccaggagcaggagaagcatcgtaaccaggagaagcgc
cgtgaggaggtggcggcggcggtgcggttacagggtcagctgcgccaggagaggcagcgg
tgggagagggagtgccagatgcgccacagccaacagggggagctggagagcaggctagag
gagagggagagacggtgtcacctggaggctgagaggctgaagcaggagtgggaagagctc
gaagagcagctgggggagtaccagcagagcctggagaggctgagggagggccagagaagc
gtggggaaggagagggagaggctggagacccagcagaagctgctgcagagctggagacac
agccgacagaggagcctgcctgtcatggtcataccgctggatggtcatcaggactcactt
cctggtcagtccggcgtccatcttgacaatgccggctcagtgtttgtcaacgaggcagcg
ttcaccacgtcaaaggtgcttaacaaccgccacgtgcaccaccacatgcagcagcaccag
agaggtgggtccctggggtacggagatgaccctcgagcccacaacagcctgaacaccata
ctggcccgctccagccagagacacacgctccaacccctctccctctccaaggctcccacg
ctccaccctgaaacaaacacaccccagtgctgggcggggggtgccggtgtcactgggtac
ctctacacaacctcaggtagacaggggacagagcacacaaccaacggtaagacccagctc
agtaaagttgtgtga
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