Salvelinus namaycush (lake trout): 120021873
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Entry
120021873 CDS
T07522
Name
(RefSeq) POU domain, class 5, transcription factor 1-like
KO
K09367
POU domain transcription factor, class 5
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120021873
03021 Transcription machinery [BR:
snh03021
]
120021873
Transcription factors [BR:
snh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
120021873
Transcription machinery [BR:
snh03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
120021873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
120021873
NCBI-ProteinID:
XP_038821645
UniProt:
A0A8U0TML7
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All DBs
Position
26:15515828..15518104
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AA seq
472 aa
AA seq
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MSERPQSPTSECNSRPDDFSRAMYAQALSQEGFGGASLQIPHGVLQHHSLLFNKAAYNGM
PPTTNQTFLPFPPGTGDYRASDLHAGDFCQPKHWCPIAAPEYTGQVAGVAAATHPTNLSQ
PNTETREQVKMSEIKLEKDVNDEYGQKIQHYPTPPSSAVAHGVYYSTPWNSSFWPGFPHT
TAANTNTQNLNSIPSTSSSSSPSLSPSPPSNGLPGVTFFNGNASQTAQAPQAQISTRSSG
SSSGGCSDSEEEENLSTEELEQFAKELKHKRITLGFTQADVGLALGNLYGKMFSQTTICR
FEALQLSFKNMCKLKPLLRRWLNEAETSDNPQDMYKIERVFVDTRKRKRRTSLEGSVRTA
LESYFVKCPKPNTQEITHIADDLCLERDVVRVWFCNRRQKGKRLALPFDEECEGQYYEQS
PPPPHMAHSPLPGQGYSLSSHPGGPTFYMPPLQRPDVFKQALHPGLVGHLTS
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagcgaccccagagccctacttcggagtgcaacagccggcctgatgacttcagc
cgggccatgtacgcccaggccttgagtcaagaggggtttggaggcgcgtcgctccagatc
ccacacggcgttctacaacatcatagtcttctcttcaacaaggccgcatataatgggatg
cctccaacaaccaatcaaacctttttgccattcccaccgggcactggtgactatagggcc
tccgacttgcacgccggtgacttttgccaacccaaacactggtgtcctatcgccgctccg
gagtacaccggccaagtagcaggggtcgcagcggctacccaccccacaaacctgagccaa
cctaacaccgaaaccagggaacaagtcaagatgtccgaaataaagctcgagaaggatgtc
aatgacgagtatgggcaaaagattcaacattatccaactccaccttcgtctgctgtagct
cacggggtttactactcgaccccatggaactcgtcgttttggcccggatttccccacacc
acggctgcgaataccaatactcaaaacctcaactccataccctcaacatcgtcttcatcg
tccccatctctctcgccctcaccccccagtaatgggttacccggggtcacgttcttcaac
gggaacgcaagccaaactgcccaagcgcctcaggcgcaaatctctacccggagcagtggt
tcctccagcggcgggtgcagtgactcggaagaggaggagaacctttcaactgaggagctg
gaacagtttgccaaggagctgaagcacaagcgtattactctgggtttcacacaagcagat
gtgggcctggccctaggcaacctttatggcaagatgttcagccagactacaatttgccgc
tttgaagcgctccagcttagtttcaagaacatgtgcaagctgaagcccctgctccggaga
tggctgaatgaggctgagacctcggacaacccccaggatatgtacaagatcgagcgggta
tttgtggacaccaggaagaggaagcggaggaccagtctggaggggtcggtgcgcactgct
ctggagtcctactttgtcaagtgtcccaaaccgaacacccaggagatcacacacattgct
gatgacctgtgtctggagagagatgtggtgcgtgtgtggttctgtaaccgcagacagaag
ggcaagcgcctggcccttccattcgatgaggagtgtgaaggacagtactatgagcagagc
ccccctcccccgcacatggctcactcccccctgcctgggcaggggtactctctctccagc
caccctgggggccccaccttctacatgccccccctccagaggccagatgtctttaagcag
gccctgcaccctggactggtgggtcacctgacaagctaa
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