Salvelinus namaycush (lake trout): 120021901
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Entry
120021901 CDS
T07522
Name
(RefSeq) claudin-4-like
KO
K06087
claudin
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03272
Virion - Hepatitis viruses
snh04382
Cornified envelope formation
snh04514
Cell adhesion molecules
snh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
120021901
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120021901
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
120021901
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
120021901
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
snh03037
]
120021901
04147 Exosome [BR:
snh04147
]
120021901
04515 Cell adhesion molecules [BR:
snh04515
]
120021901
Cilium and associated proteins [BR:
snh03037
]
Other cilia and associated proteins
Stereociliary proteins
120021901
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
120021901
Exosomal proteins of colorectal cancer cells
120021901
Cell adhesion molecules [BR:
snh04515
]
Immunoglobulin superfamily
L1 family
120021901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Clc-like
Motif
Other DBs
NCBI-GeneID:
120021901
NCBI-ProteinID:
XP_038821669
UniProt:
A0A8U0TNA3
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All DBs
Position
Sna26:complement(36155729..36157725)
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AA seq
224 aa
AA seq
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MASFALELVGVILSVLGWILSIVSCALPMWRVTAFIGANIITAQVYWEGLWMSCVFQSTG
QMQCKVYDSMLALPQDLQAARALTVVTIILGVIALLVATIGAKCTNCIEEEGVKAKVMVS
AGVAFILASLTQMVPVSWSAHTIIQQFYNPIIPSAQKMEIGAALYLGWAAAALLLVGGAI
LCCSCPPQEDKPITRYSIPPQSRMVYSATPRSAAPSSYNRRDYV
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtttgctctggagctagtgggtgtgatcctgtcagtgctgggctggatactg
agcatagtgagctgtgctctgcccatgtggagggtcacagctttcatcggagccaacatc
atcacagcccaggtctactgggaagggttatggatgagctgtgtgttccagagcacggga
cagatgcagtgtaaggtctatgactccatgctggccttgccccaggacctgcaggccgcc
agggctctcaccgtggtcaccatcatcctgggggtcatagctctcctcgtggctaccatt
ggggctaagtgcaccaactgcatcgaggaggagggggtgaaggccaaggtgatggtgtct
gccggagtggcctttatcctggcttcgctgacccagatggtgcctgtgtcctggtcggct
cacaccatcatccagcagttctacaaccccatcatcccctcagcacagaagatggagatc
ggggcggcgctgtacctgggctgggccgcagccgcgctgctgctggtggggggggctatc
ctctgctgcagctgccctccccaggaggacaaacccattacgaggtactcaatcccaccc
cagagccggatggtgtattctgcaactccacggtctgcagcccccagctcctacaacagg
agagactacgtgtga
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