Salvelinus namaycush (lake trout): 120021964
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Entry
120021964 CDS
T07522
Symbol
clasp2
Name
(RefSeq) CLIP-associating protein 2 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120021964 (clasp2)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
snh04812
]
120021964 (clasp2)
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
120021964 (clasp2)
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
120021964 (clasp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
HEAT_EF3_N
CEP104-like_TOG
HEAT
Cnd1
TOR1L1_N
ParcG
IFRD
HEAT_DAAF5
MMS19_C
TAN
Motif
Other DBs
NCBI-GeneID:
120021964
NCBI-ProteinID:
XP_038821687
UniProt:
A0A8U0PB65
LinkDB
All DBs
Position
Sna27:15804644..15907435
Genome browser
AA seq
1510 aa
AA seq
DB search
MEEHDNMDYFYQQVLQKDVTRRLQIGQDLIDYLNDPQRSSDVEQDKPRLDKTVDELTGWV
NSSNYKVALLGIDIAGAFVDRLGERFRGYLGTVVPALVDRLGDSKDQVREQSQTVILRCM
EVTASPMYVWERLLPGFKHKNFRSREGVCLVLCATLNTYGAQPLSLSKIVPYLCTLTGDQ
NPQVREAATASLVDVYRHIGERVRADLGKRGLPATRLQTIYGRFDEALNSGNMALSPSHD
HSFEDDVDSTDGNRAQAAFKVPKIPKKPAESSTARRPSATGPKIGGASKDGAGGIDEEDF
IKAFTDVPTVQIYSSRDLEDNLNKIREICSDDKHDWDQRAAAMKKIRSLIVAGATEHECF
YQHLRLLDGAFKLSAKDLRSQVVREACITVAHLSTVLGNKFDHGAEGILPVLFNLIPNCA
KVMATSGVSAIRFIIRHTHVPRLIPLITSNCTCKSVAVRRKCFDFLDLLLQEWQTQTLER
HTAVMVASIKKGIADADAEARVEARKAYWGLRNHFPGEADSLFNSLEPSYQRSLQSSLRN
AGSVASLPQSDRSSSSSQESLNRPLSSKWSAAPGRVPAGHKGGASPGSLQRSRSDVDVNA
ATVAKQRHIGQVGAGRLTPGSYSSLGRLRTKQPLTTATSISQVDSRGRTRTKMVSQSQPG
SRSGSPGRVLTSTALSTLGSGAQRVLAGAGGRRSRIPRSQGCSRDSSPTRLSVAPSSISS
IYNGASRGARGSRIPRPSMSQGCSREASRESSRDTSPVRSFTPLASRHYSRSTGALHTAD
ALGAAGSGYSISQSSRLSSSVSAMRILNTGSDVEEALADALKKPARRRYENYGMYSDDDA
NSDASSACSERSYSSRNGGAIPTYMRQTEDVAEVLNRCASANWSERKEGLLGLQALLKNQ
RTLSRVELKRLCEIFTRMFADPHSKRESGSRVYGTAESGISSASFKRVFSMFLETLVDFV
LVHREDLQDWLFVLLTQLLKKMGADLLGSVQAKVQRALDITRESFPNDLQFTILMRFTVD
QTQTPNLKVKVAVLKYIETLALQMEPQDFVNSSETRLAVSRIITWTTEPKSSDVRKAAQS
VLISLFQLNTPEFTMLLAALPKTFQDGATKLLQNHLRNTGNAAQAPTGSPLTRHTPRSPA
SWSSPLTSPSNTSQNTSSPSAFDYDTENMNSEDIYSSLRGVTEAIQNFSVRSQEDMNEPV
RRREGEEGGSAGADQMDVGRTALDNKTSLLNTPLLSSSPRVSRDPFTDSPFKHSVIDTSL
DESDQQTDDSSIDQSELVSELLKELSNHNERVEERKAALCELLKLIRENTLQVSWDEHFK
TILLLLLETLGDREHVIRALALRVLREILSRQPWRFKNYAELTIMKALEAHKDPHKEVVR
AAEETAAMLASSISPDQCIKVLCPIIQSADYPINLAAIKMQTKVIEKVPHEGLVSMLPEI
VPGLIQGYDNSESSVRKACVFCLVALYAVIGEELKPHLNQLSGSKLKLLNLYIKRAQSGS
SGGEPPADSL
NT seq
4533 nt
NT seq
+upstream
nt +downstream
nt
atggaggaacatgacaacatggattatttttaccagcaggtcctgcagaaagacgttacc
cgcaggctgcagatcgggcaggacctcatagactacctgaacgacccgcagaggtcctcc
gatgtggagcaagacaaaccacggctggataaaactgtagatgagctgacgggatgggtc
aactccagcaactacaaggtggcgttgttggggatagacattgccggtgcgtttgtcgat
cgcttgggggagcgcttcagaggatacctgggaacagtggtccctgcgttagtggaccgg
ttgggggacagtaaggaccaggtcagagaacagagtcagactgtcatcctccgctgtatg
gaagtcacagcatcgcctatgtatgtgtgggagaggttgcttcctggttttaaacataag
aacttccgcagcagagagggggtgtgtctggttctctgcgccaccctcaacacgtatggt
gctcagcctttgagtctcagtaagatcgttccgtacctctgcactctgacaggagatcag
aacccacaggtgcgtgaggctgccacagcatcgctggtggatgtgtatcgccacatagga
gagagagtcagagccgacctgggaaagagaggcctgcctgccacacggttacagacaata
tacgggcgttttgatgaagcgttgaattctgggaacatggcgctcagccccagtcacgac
catagttttgaggatgatgtggacagtacggatgggaatcgtgctcaggctgccttcaaa
gtccccaaaatccccaagaagccggcagagtcctctactgcacgcagacccagcgcaaca
ggacccaagatcggaggtgcgtctaaggatggagctgggggcatcgatgaggaagacttc
atcaaagccttcactgacgtccccacagtacagatctactcgtctcgtgacctggaggat
aacctgaataagatcagagagatctgttctgatgacaaacatgactgggaccagagagct
gccgcaatgaagaagatccgctcgctgattgttgccggggcaacggagcacgagtgtttc
taccaacacctgaggctgttggacggagcgttcaaactgtcagctaaagacctccgatca
caggtggtacgagaggcctgcatcactgtggcgcacctgtcgacagtgttgggtaataag
tttgaccatggggctgaggggattcttcctgtcctgttcaacctcatccctaactgtgcc
aaggttatggccacttcaggggtgtctgctatacgcttcatcatacggcacacacacgtc
cccagactcattcccctgatcaccagtaactgcacctgcaagtctgtggccgtcagaagg
aaatgttttgacttcttggacctgctgctgcaggagtggcagacccagactctggagaga
catacagcagtgatggtagcgagcattaagaaggggattgcagatgccgacgcagaggcc
agagtagaggcccgcaaggcctactggggtctgaggaaccattttccgggagaggcggac
tctctgttcaactcgttagaaccgtcctatcagaggagcctccagtcgtctctcaggaat
gccgggagcgtggcgtctcttcctcaaagcgaccgctcctcttcctcttcacaggagagc
ctcaatcgtcctctgtcgtctaaatggtcagctgctcctggtagagtcccggctggtcat
aagggtggggcgtcgccaggctccctgcagcgttcccgtagcgatgtggatgttaatgca
gcaacggttgctaagcagcggcacatcgggcaggtgggggcagggagactgacccccggc
tcctactcgtcattgggtcgtctgaggaccaaacagcctctcaccacagcaaccagcatc
agccaggtggactcccggggacgcacccgcaccaagatggtgtcccagtcacaacccggc
agtcggagtggttccccgggccgcgtcctgaccagtaccgctctgagtacgctgggttct
ggagcccagagggtcctagctggggccggagggagacgtagccgcatcccccgcagccag
ggctgctcacgagactcctcccctacacgcctgtctgtcgctccctccagtattagttcc
atctacaacggcgcaagcagaggagctcggggcagtcgtatcccccgacccagtatgagt
cagggctgcagcagggaggccagcagagagagcagcagagacaccagccctgtacgctcc
tttacacccctggcgtcgcggcactactctcgctccactggagctctccataccgccgac
gctttaggggccgcagggtcagggtacagcatcagtcagtccagtcgtctgtcctcatcc
gtcagcgccatgagaatcctcaacacaggatctgatgtagaagaggccctcgctgatgcc
ctgaagaagccagcgcggcggcgctatgagaactatgggatgtattcggatgatgatgct
aacagtgatgcgtccagcgcctgctcagagcgctcctacagctccaggaacggaggagcc
atccctacgtacatgagacagactgaggatgtggccgaggtgttgaaccgctgtgccagt
gccaactggtcggagaggaaggaggggctgctgggtctacaggctctactgaagaaccaa
cgcaccctcagtcgtgtggagttgaagaggttgtgtgagatcttcaccaggatgtttgca
gacccccatagtaagcgagaatccggatctagggtctatggaacggcagaatccggtata
agctcagcctccttcaagagagtgttcagtatgttcttagagaccctagtggattttgtc
ctggtgcatagagaagacctgcaggactggctgttcgtcctgctcacccagctgctgaag
aagatgggagctgacctactgggatcagtacaggccaaggtccagagagcactggacatc
acacgagagtctttccccaacgacctccagttcactatcctcatgaggttcactgtggac
cagactcagacaccaaacctcaaggtgaaggtggctgttctgaagtacattgagaccttg
gccctgcagatggagcctcaggactttgtgaactccagtgagacgcgcctggctgtgtct
cgcatcatcacctggaccacagagcccaagagctccgacgtcaggaaggctgcccagtcg
gtgttgatctcgttgttccagttgaacaccccagagttcaccatgctgctggcagctctg
cccaagaccttccaggatggcgccaccaaactgctacagaaccacctgaggaacacaggc
aatgctgcacaggccccgacaggaagccctctgacacgccacaccccccgctctcctgcc
agctggtccagccccctcacctctcctagcaacacatcacagaacacatcctcacccagt
gcatttgactacgacacagagaacatgaactcagaggacatctacagtagtctgagagga
gtgacggaggccatccagaacttctccgtccgcagccaggaagacatgaatgaaccggtc
agacggagggaaggagaggagggtggtagtgctggtgctgaccagatggatgtaggtcgt
acagctctggacaacaagacgtctctcctcaacacccccctgctctcctcttctccccgg
gtgtcccgtgaccccttcactgactcccccttcaaacacagcgtcatagatacttcacta
gacgaatcagaccagcaaactgacgacagcagcattgaccaatcggagctggtgtctgag
ctgctgaaggagctgtccaatcacaatgagcgtgtggaggagaggaaggcagcgctttgt
gagctcttgaagctgattcgagaaaacaccctgcaggtctcctgggatgaacacttcaaa
accatcctcctgttactactggagacgctgggggacagagagcatgtgatcagggcgtta
gctctgcgtgttctgagggagattctgagccgccagccctggaggtttaagaactacgct
gaactcaccatcatgaaggccctggaggcgcacaaggacccacacaaagaggtggtgcga
gcggcagaggagactgccgccatgctggcgtcgtccatcagtccagaccagtgtatcaag
gtgttgtgtcctatcatccagtcagctgactaccccatcaacctggctgccatcaagatg
cagactaaagttatagagaaggtcccccatgaaggactagtcagcatgctgcctgagata
gtccccggactcatacagggttatgacaactctgagagcagtgtgaggaaggcctgtgta
ttctgtctggtggccctctacgcagtcataggggaggagctaaaacctcacctcaaccaa
ctgtctggcagcaaattgaagttgttgaatctgtacatcaagcgtgcccagtccggctcc
agtggtggtgagccgccagcagacagcctatag
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