Salvelinus namaycush (lake trout): 120022037
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Entry
120022037 CDS
T07522
Name
(RefSeq) LHFPL tetraspan subfamily member 3 protein-like
KO
K23893
LHFPL tetraspan subfamily member protein
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
snh02000
]
120022037
03037 Cilium and associated proteins [BR:
snh03037
]
120022037
Transporters [BR:
snh02000
]
Other transporters
Pores ion channels [TC:
1
]
120022037
Cilium and associated proteins [BR:
snh03037
]
Other cilia and associated proteins
Stereociliary proteins
120022037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
L_HMGIC_fpl
PMP22_Claudin
Claudin_2
PSP94
Pacifastin_I
Zn_ribbon_RPAB4
Motif
Other DBs
NCBI-GeneID:
120022037
NCBI-ProteinID:
XP_038821765
UniProt:
A0A8U0TMQ7
LinkDB
All DBs
Position
Sna2:49145024..49230255
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AA seq
288 aa
AA seq
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MLPSQEASKIYHDNYMRNSRAIGVLWAIFTICLAIINVVVFIQPYWIGDSVNTPHAGYFG
LFHYCVGTGNSNRELTCQGTFAEFSSIPSSAFKAATFFVLLSMVLILGCIACFILFFFCN
TATVYKTCAWMQLLCAVCLILGCMIFPDGWDSEVVRDMCGEETGKYTLGNCSVRWAYMLA
IVGIMDALILSFLAFVLGNRQNDFQLEEQLKAEQKGPCIYKEVQFQPGQTFYRGCDKCYC
HENGYFCLSPMKPTTWPNKCQRVSTECGYRIVYKELPEVECRAYSWIR
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgctgccttcgcaagaagcctccaagatttaccatgacaactacatgcggaattcgcgg
gccattggggttctgtgggctattttcaccatatgtttagccattattaacgtggtggtg
ttcattcagccctactggattggggacagcgtgaacaccccacacgccggctacttcggc
ttgttccactactgcgtgggcactgggaactccaaccgggagctcacctgccaaggaacc
ttcgccgaattcagcagcatcccttcgagcgcatttaaagcggcaaccttcttcgtgttg
ctgtccatggtgctgatcttgggatgcatcgcctgcttcatcctcttcttcttctgcaac
accgccactgtctacaagacctgcgcttggatgcagctgctatgtgccgtgtgtttgatc
ctgggctgtatgatctttccggatggctgggactcggaagtggtgcgagacatgtgtggc
gaggagacggggaagtacacgctggggaactgttcggtgcgctgggcctacatgctggct
atcgttggcatcatggacgccctcatcctctccttcctggccttcgtgctgggcaaccgg
cagaacgacttccagctggaggagcagcttaaagcagaacaaaaaggtccgtgtatttac
aaggaggttcagtttcagcctggacagaccttctacaggggctgtgacaagtgctactgc
cacgaaaatggctacttttgcctctcaccgatgaaacctaccacatggcccaacaagtgc
cagcgggtttcgacagagtgtggctaccgcatcgtttataaggagttgccggaggtggag
tgtcgtgcctacagctggatccggtga
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