Salvelinus namaycush (lake trout): 120022050
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Entry
120022050 CDS
T07522
Name
(RefSeq) integrin beta-8-like
KO
K06591
integrin beta 8
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04510
Focal adhesion
snh04512
ECM-receptor interaction
snh04514
Cell adhesion molecule (CAM) interaction
snh04518
Integrin signaling
snh04810
Regulation of actin cytoskeleton
snh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120022050
04514 Cell adhesion molecule (CAM) interaction
120022050
04518 Integrin signaling
120022050
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120022050
09142 Cell motility
04820 Cytoskeleton in muscle cells
120022050
04810 Regulation of actin cytoskeleton
120022050
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120022050
04515 Cell adhesion molecules [BR:
snh04515
]
120022050
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120022050
Cell adhesion molecules [BR:
snh04515
]
Integrins
Integrin beta subunits
120022050
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
PSI_integrin
vWA_SIBA-E
PSI
CoV_NSP13_ZBD
Motif
Other DBs
NCBI-GeneID:
120022050
NCBI-ProteinID:
XP_038821772
UniProt:
A0A8U0PBE9
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All DBs
Position
27:complement(15130146..15144868)
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AA seq
464 aa
AA seq
DB search
MTSWLHKYGYPTLHCVLFCVVLAANIIGGSSHSGESICSSPPVSSCSECLRRGPQCAWCF
EAGFLDGAEVGERCDLVGNLARRGCGLEFIEHPEVMVEVNATTSSTQVSPGEITLTLRPG
AEASVIVAVQQLERYPVDLYYLVDVSASMQENLDQLKTVGVALSHRMREHSSDLRLGFGS
FVDKPVSPYINVHPSKINNPCSDYEVKCRPAHGFHHVLSMTANMSEFTRIIKRQRISGNM
DTPEGGLDAMLQATVCQGEVGWRGEAKRLLLLMTDQPSHLALDSRLAGIVTPHDGLCHLE
NNVYMESTTMDHPSLGLLAEKLLENHIYSLFAVEQLQYQWYEELVRLLPGSNLLFQAPKL
IDVVVDAYKRLLSVVQVSVSVEDRAFSRFLVSVSPLCPEGSVSHDNRSCSNVQPNQTVYF
NITIGLHSCPDDDDDVDDVVQVFVRPVGYNESTIIKIQTVIIKT
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgacttcctggctacataaatacggctacccgactctgcattgcgtgctgttctgcgtg
gtattggccgctaacatcatcggcgggagctctcattccggtgagagtatatgttcgtct
cctcctgtctcgtcgtgttcagagtgcctccgacgcggaccacagtgtgcctggtgcttt
gaggcgggtttcctggatggagcggaggtgggagagcgctgcgacctggtggggaacctg
gcaaggagggggtgtggtctagagttcatagagcatccagaggtcatggtggaggtcaat
gctacgaccagcagtactcaggtgtcaccgggagagatcaccctcacactcagaccaggt
gctgaggccagtgtgatagtagcagtacaacagttagagaggtatcctgttgatctgtac
tacctggtggacgtatcagcatccatgcaggaaaacctggaccagctgaagacggtgggc
gtagccttgtcccaccgtatgagagaacattccagtgatttgcgtctggggttcggctcc
ttcgttgacaaacctgtctccccctacatcaatgtacacccctctaagataaataacccc
tgcagtgactatgaggtgaagtgtcgcccagcccatggcttccaccatgttcttagtatg
acggcaaacatgtccgagtttacacgcatcatcaagagacagaggatatcaggcaacatg
gacacaccagagggagggttagacgctatgctccaagctactgtatgtcagggtgaggtg
ggttggcgtggggaggccaagcgtctgttgttgctgatgacagaccagccttctcacctg
gcgttggacagcagactggctggtatagtcacacctcacgatggcctctgccatctggag
aacaacgtctatatggagagcactaccatggaccatcccagtttaggcctgctggctgag
aagcttctagagaaccacatctactctctctttgctgtggaacaactacaatatcagtgg
tatgaggagttggtcaggttgctaccaggctccaatcttctgttccaggctcccaaactt
atagacgtggtggtggatgcatacaagaggttgttgtcagttgtccaggtgtctgtgtca
gtggaggacagagcgttcagccgtttcctggtcagcgtctctcctctctgtccggaagga
tctgtatcccacgacaaccgcagctgctccaacgtccagcccaaccagacggtctacttc
aacatcaccatcggcctgcactcctgtcctgacgatgatgatgatgtagatgacgtggtc
caggtcttcgtcaggcccgtgggttacaatgagtcaaccatcatcaagatacagaccgta
ataatcaagacttga
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