Salvelinus namaycush (lake trout): 120022168
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Entry
120022168 CDS
T07522
Name
(RefSeq) splicing factor, proline- and glutamine-rich-like
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
snh01009
]
120022168
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snh03021
]
120022168
03041 Spliceosome [BR:
snh03041
]
120022168
Protein phosphatases and associated proteins [BR:
snh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120022168
Transcription machinery [BR:
snh03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
120022168
Spliceosome [BR:
snh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
120022168
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
Motif
Other DBs
NCBI-GeneID:
120022168
NCBI-ProteinID:
XP_038821968
UniProt:
A0A8U0PB90
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Position
Sna27:complement(32725968..32755517)
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AA seq
633 aa
AA seq
DB search
MSRDRFNLNVRGNNRGAGFQRRGGAGPMRGGMGNMNNFRQNQHPFQRGPHPGNFGKPPNQ
IPQITPQKPPAPTLSQPGAQAIRPPPTPGPALTMKGPIQQQQAAAAAAAPVAVAAATPTA
AAAATPMAAPPAAAVIAPAAQPKMLSPPPKPVPPKPALSSPPPNQIKKPTLSSPPPNQMN
RNLQRPGPGNANGNKSAPVNKKPEPQTQKNTSNEAEEAQPPNELRATLSSLRRPGEKTYT
QRCRLFIGNLPNDISDDTFKKLFAKYGEPSEIFINKNKGFGFIRLESRALAEIAKAELDD
VPMKGRPLRVRFATHSAALSVKNLSPFVSNELLEEAFSQFGVVERAVVIVDDRGRSTGKG
IVEFASKPAARKALDRCNDGVFLLTTSPRPIVVEPLEQYDDEDGLPEKLAQKNHNYHQER
EEPPRFARPGTFEFEYSKRWKSLDDMEKQQRQQVEKNIREAREKLEGEMDDAFHVHQANM
IRQDLLRREEELRRMEEMHSAEMQKRKEMQLRQEEERRIREEETLRQREIDEQIRRKREE
AYRSGNFMDNRDMRMTQGGAMGMADNQFGSPNQKFPMGLQGMGAPNAGGAMMPNEMRNER
NFPQGGRGAMGPNNQGFGRVREEFDGPAKKPRF
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgggacagatttaaccttaacgttagaggaaataatcgtggagctggatttcaa
cgccggggaggtgctggcccgatgcgaggtggaatgggtaacatgaataattttagacaa
aaccaacacccttttcaaagagggcctcatcccggtaactttggaaaaccacccaaccag
atacctcagataacccctcagaagccacccgcaccaactctttcccagccaggcgctcaa
gcgattcggccaccacctactcctggccctgcgctaaccatgaagggccccatacagcaa
cagcaggccgccgccgcagcagcagctccggtcgccgtagcggcagcaactccgacggcc
gcagcagcagcaactccgatggccgcacctccggcggccgcagtaatagcgccggctgct
caaccaaaaatgctgtccccacctccgaagcctgttcctccgaaacccgcactttcatct
cccccaccaaaccaaattaaaaaaccgactctctcatctcccccaccaaaccagatgaat
aggaacctgcaaagaccaggacccggcaacgccaatgggaataaatctgcacccgtgaac
aaaaaacctgaacctcaaacgcagaagaacacttcaaatgaggccgaggaagcccagccc
cccaatgagttgagagcgacattgtcctcgttgcgcagacctggcgagaagacatacact
caacgatgccgccttttcattggaaaccttcccaacgatatttcggatgacacattcaag
aagctgtttgcgaagtatggcgagcccagtgagattttcatcaacaaaaacaaaggcttt
ggcttcatacgcctcgaatcccgtgcattggctgagatagctaaagctgagctggatgac
gtacccatgaaaggcagaccgcttcgggtgcgctttgcaactcactcggctgcactgtct
gtgaagaacttatcaccttttgtttccaatgagttactggaggaggccttttcccagttt
ggagtggtggagagggctgttgtaattgtagatgatcgcgggcgctccactggcaagggc
attgtcgaatttgcctctaaacctgctgcacgaaaggccctggatcgttgcaatgatgga
gtcttcttgctcaccacgtcacctcgtccaatcgtcgttgagccccttgaacaatacgat
gatgaggatggtctaccagagaaactggcacagaagaaccacaactatcatcaggagcgg
gaggagccacccaggtttgcccgtcctggcacgtttgagtttgaatactctaagcgttgg
aagtccctggacgacatggagaagcagcagcgccagcaagtggagaagaacatccgcgaa
gcccgcgagaaactggagggagagatggacgatgctttccatgtgcaccaggccaacatg
atccgccaagatctgctgaggcgtgaggaggagctacgacgcatggaggagatgcacagt
gcggagatgcagaagaggaaagagatgcagctcaggcaggaggaggaacgtcgcatacgt
gaggaggagacgctccgccagagggagattgatgaacaaatccggcgcaagcgggaggag
gcctacagaagtgggaacttcatggacaatagggatatgagaatgactcagggtggcgcc
atgggcatggctgacaatcaatttggctcacccaaccagaagttccccatgggactccaa
ggcatgggggcacctaacgctgggggagccatgatgcccaacgaaatgcgcaacgagcgg
aacttccctcagggaggccggggggcaatgggtcctaacaaccaagggtttggcagggtc
cgtgaggagtttgatgggcctgccaagaagccccgcttttaa
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