Salvelinus namaycush (lake trout): 120022174
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Entry
120022174 CDS
T07522
Name
(RefSeq) elongation factor 1-alpha, oocyte form
KO
K03231
elongation factor 1-alpha
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120022174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120022174
03016 Transfer RNA biogenesis [BR:
snh03016
]
120022174
03012 Translation factors [BR:
snh03012
]
120022174
04131 Membrane trafficking [BR:
snh04131
]
120022174
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120022174
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
120022174
Transfer RNA biogenesis [BR:
snh03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
120022174
Translation factors [BR:
snh03012
]
Eukaryotic type
Elongation factors
120022174
Membrane trafficking [BR:
snh04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
120022174
Exosome [BR:
snh04147
]
Exosomal proteins
Proteins found in most exosomes
120022174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
120022174
NCBI-ProteinID:
XP_038821976
UniProt:
A0A8U0PCK2
LinkDB
All DBs
Position
Sna27:complement(32829176..32832721)
Genome browser
AA seq
461 aa
AA seq
DB search
MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETGRYYVTIIDAPGHRDFIKNMITGTSQADCAVLVVAGGV
GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSQKRFEEIQKEVSTYIKK
IGYNPATVAFVPISGWHGDNMLEASPNMAWFKGWKVERKDGNSNGVTLLEALDSIMPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGTLKAGMIVTFAPANVTTEVKSVEMHHETLE
SAMPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPMEAGTFTAQVIILNHPGQISQGYAPV
LDCHTAHIACKFSELKEKIDRRSGKKLEDAPKFLKSGDAAIVDMIPGKPMCVESFQEYPP
LGRFAVRDMRQTVAVGVIKAVDKKAASSGKVTKSAVKAGKK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggaaaagatccacatcaacatcgtggtcattggccatgtcgactccggcaag
tccaccaccaccggccatctgatctacaaatgcgggggtattgacaagagaaccattgag
aagttcgagaaggaggctgctgagatgggtaagggctctttcaagtatgcctgggtgctg
gacaagctgaaggctgagcgtgagcgtggtatcacaattgacatttccctgtggaagttc
gagactggcaggtactacgtcacaatcattgatgcccccggacacagagacttcatcaag
aacatgatcactggtacatctcaggctgattgtgctgtgctggtcgttgctggtggtgtt
ggtgagtttgaggccggtatctcaaagaacgggcagactcgtgagcacgctctccttgct
ttcactctgggagtgaagcagctcatcgttggcgtcaacaagatggactccacagagccc
ccctacagccagaagcgttttgaggaaatccagaaggaggtcagcacctacatcaagaag
atcggctataaccctgccacagtcgcctttgtgcccatctctggatggcatggggacaac
atgctggaggctagccctaacatggcctggttcaagggatggaaggtcgagcgtaaggat
ggtaactccaatggggtgactctgctggaggcactggacagcatcatgcccccatcccgg
cccacagacaagccccttcgtctgcccctccaggacgtttacaaaatcggtggtattgga
actgtacctgtgggccgtgtggagacgggcaccctcaaggccggtatgatcgtcaccttc
gcccccgctaacgtcaccactgaagtcaagtctgtggagatgcaccacgagaccctggaa
tcggctatgcccggtgacaacgtcggcttcaacgtcaagaacgtgtccgtcaaggatatc
cgtcgtggcaacgtagctggagacagcaagaacgaccctccaatggaggctggcactttc
actgctcaagtaatcatcctgaaccaccctggccagatctcccagggctatgcccctgtg
ctggattgccatactgctcacatcgcctgcaagttcagtgagctcaaggagaagatcgac
cgtcggtccggcaagaagcttgaagatgcccccaagttcctgaagtctggggacgctgct
atcgttgacatgatccccggcaagcccatgtgtgtggagagtttccaggaatacccccct
cttggtcgttttgctgtgcgtgacatgaggcagacagtcgctgtcggtgtcatcaaggct
gttgacaagaaggccgcctcaagcggaaaggtcacaaagtctgccgttaaggccggtaaa
aagtga
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