Salvelinus namaycush (lake trout): 120022219
Help
Entry
120022219 CDS
T07522
Name
(RefSeq) semaphorin-6D-like
KO
K06842
semaphorin 6
Organism
snh
Salvelinus namaycush (lake trout)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
120022219
NCBI-ProteinID:
XP_038822026
UniProt:
A0A8U0PA42
LinkDB
All DBs
Position
Sna27:29247376..29357355
Genome browser
AA seq
1034 aa
AA seq
DB search
MVPPKWMRRRLLLAALTLTSCLLFAMATPFPKDLEPINVVGWEHSYLYPGFQGLVSDNDT
ARLGLDFQRMLRINHILYIAARDHVFAVNLTTAGDDFVPQLKLTWRSKDVAKCTVRGRNS
DECYNYVKVLVPRNDETLFACGTNAFNPTCRNYKMTTLEQVGEEVLGQARCPFESGQSNL
GLFAGGDFYSATMTDFLASDAVIYRSLGDDSPVLRTVKYDSKWLREPHFHHAIEYGNYVY
FFLSEIAVEYTTLGKVVFSRVARVCKNDNGGSPRVLERYWTSFLKARLNCSVPGDSFFYF
DVLQSLTNVLQINQRPAVVGVFTTQANSIPGSAVCAFYMDDIEKAFNGKFKEQKTSDSAW
TPVPEEQVPKPRPGSCAGDGPASAYKSSINFPDDTLTFIKSYPLMDEAVPSVNDRPCFTR
TTSRYKLTQIAVDTSAGPSKDRTVVFLGSEDGRVLKVLSSTHPNASFGSQLLEDIDVYNP
SKCNVQGQDDRRILGMELDKEHHALFVAFTSCVIRVPLSRCTEHGACKKSCLSSRDPYCI
WLRTGSCANMAPGFKAGFDQDIEGDHSLYPDNCHADVLATTRNQNSAADSAYGVRRLPDM
EKSSPSVHYTLLIACVLVAFFLGAILSGFLVSCYCSHNARRARRLGKDPEASIHPALSLR
SLAKLNGLLDGQPKEEKLDVSTPKMYSSFIPSGKEHTPERHGMSLGDPDLNLSQGENLSG
LPTPDSTPELPIKNMKAFRNQWERNQNCNNAKESKAPPGTGFSLGSSRSVTQQVFPFSHS
LTNGHALGHLPEERKIPNDERAQGASASHSCCPQTVVDVAALDELLKHIYEVSASGSRSI
TVLTSPCAPLPGSSSSSHNHSSFRSQPQIPETESATYYSSSTLPRDSLTRRLDVPPDAVA
ASSAGATPLQQQSIPERSAVTRHHSQRHLMIKMGNGGAVPRQHSFRQGGGGPPPHQLLTR
MNSSGGGGGGVGCEAHQPLIPSACLTRQHSYSEPPHLHRAAIVRRTASLKPQVPPKPLFL
PATSPVNEQGKYNY
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggtccctccgaaatggatgaggaggcgtctcctgctggcggccctcacactcacttcc
tgtctactgttcgccatggccacgcccttccccaaggacctggagccaatcaacgttgtc
ggatgggagcactcctacctatacccagggttccaggggctggtgtcggacaacgacaca
gccagactaggcctggacttccagaggatgctgaggatcaatcacatactctacatcgct
gccagggaccatgtctttgcagtaaacctgaccacagctggtgacgacttcgtcccccag
ctgaagctcacatggaggtccaaggatgtggccaagtgtaccgtgaggggtagaaacagt
gatgagtgctacaactatgtcaaagtgctggtaccgcggaacgatgagaccctgtttgct
tgcggcaccaatgccttcaaccccacctgccgcaactacaagatgaccaccctggagcag
gttggcgaagaggtgttgggtcaggcacgctgtcccttcgagtcgggccaatccaacctc
ggcctctttgctggtggtgatttctactctgccaccatgaccgacttcctggccagcgac
gctgtcatctaccgtagtcttggcgacgacagccccgtcctgcggaccgtcaagtacgac
tccaagtggctccgagagccccatttccaccatgcgatcgagtatgggaattatgtctac
ttcttcctcagtgagattgcagtggagtacaccaccctgggcaaggtggtgttctctcgt
gtggcgcgggtgtgtaagaacgacaacggcggctctcctcgggtgctggagcgctactgg
acctccttcctgaaggcgcggctcaactgctcggtgcccggcgactccttcttctacttc
gatgtgctgcagtcactcaccaacgtgctgcagatcaaccagcgccccgcagtggtggga
gtgttcactacgcaagctaacagtatccctggctcggcagtgtgtgccttctacatggac
gacatagagaaggccttcaatgggaagtttaaggagcagaagaccagtgactcagcctgg
accccagtaccggaggaacaggtgcctaagcccaggcctggttcctgtgccggtgatggc
ccggcctcggcctacaagtcatccatcaactttcccgacgacacgctgaccttcatcaag
tcttacccgctgatggacgaggcggtcccctccgtcaacgaccggccctgcttcacccgc
accaccagcaggtacaagctgactcagattgcggtggacacctctgccgggccgtctaag
gaccgcactgtggtcttcctgggctcagaggatggcagggtcctgaaggtgttgtccagc
actcatcctaacgcctcctttggctcccaactcttggaggacattgatgtctataacccc
tctaagtgtaacgttcaggggcaggatgacaggaggattctgggaatggagctggataag
gagcatcatgccttgttcgtggccttcaccagctgtgtcatcagagtaccactcagccgc
tgcacggagcacggcgcctgtaaaaagagttgtctgtcgtcccgcgacccgtactgcatc
tggctccggactgggagctgtgccaacatggcgccagggttcaaggctggctttgaccag
gacatcgagggagaccactcactgtaccctgacaactgccacgcagatgtgctggcgacc
acacgaaaccagaactctgcggcagactcggcctacggtgtccgaaggctccctgacatg
gagaagtccagccccagcgtccactataccctcctgatcgcctgcgttctggtggccttc
ttccttggtgccatcctctccggcttcctggtgtcatgctactgcagtcacaacgcccgc
cgtgcccgccggcttggcaaggaccctgaagcgtccatccaccccgccctctcgttgcga
agcctggccaagctaaacggcctgctggatggccagcccaaagaggagaagctggatgtg
tccacacccaagatgtacagctccttcattcccagtgggaaggagcacactccagagagg
cacgggatgtccctgggagacccggaccttaacctctcccaaggggagaacctctcgggc
ctgcccaccccggactccaccccggagctgcccatcaagaacatgaaggccttccggaac
cagtgggagaggaaccagaactgcaacaacgccaaggagtccaaggcaccccccggcact
ggcttcagcctgggttcgtcaaggtccgtcacccagcaggtgttccccttctctcacagc
ctgaccaacggccatgccctggggcacctgcctgaggagaggaagatccccaacgacgag
cgtgcgcagggggcttcggcctcccactcctgctgcccgcagacggtggtggatgtggcg
gccctggacgagctcctcaagcacatctacgaggtcagcgcctcgggcagccgaagcatc
actgtgctgacctcaccgtgtgcccccctaccgggtagctccagttccagccataaccac
agcagcttcagatcccagccccagatccctgagacggagtcagccacgtactacagctcc
tccaccctgcccagggacagtctgacccgccgcctggacgtgcccccggacgccgtcgcc
gcctcctcggccggcgccaccccactgcagcagcagtccatccccgagcgaagcgctgtg
actcgccaccactcccagaggcacttaatgatcaagatgggcaatggaggggccgtcccg
cgacaacacagcttcagacagggcgggggtgggccaccgccccaccaactgctcacccgg
atgaactcgtcaggtggtggcgggggaggggtcggctgtgaggcccaccagccgctcatc
cccagtgcctgcctgacacggcagcacagctacagcgaaccgccccaccttcaccgcgcc
gccatcgtacgccgcacggcctccctcaagccccaagtgccccccaagcccctcttcctg
cccgccacttcgcccgtaaatgagcaaggcaagtacaactactga
DBGET
integrated database retrieval system