Salvelinus namaycush (lake trout): 120022221
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Entry
120022221 CDS
T07522
Name
(RefSeq) zinc finger and BTB domain-containing protein 10-like
KO
K10497
zinc finger and BTB domain-containing protein 10
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120022221
04121 Ubiquitin system [BR:
snh04121
]
120022221
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
120022221
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
120022221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
zf-H2C2_2
zf-C17orf113
zf-C2H2
zf-H2C2_5
BTB_KLHL33
BTB_SANBR
Fucose_pyrophosphorylase
zf-C2H2_16
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
120022221
NCBI-ProteinID:
XP_038822029
UniProt:
A0A8U0TNM4
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Position
Sna27:complement(14110079..14129252)
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AA seq
764 aa
AA seq
DB search
MSGERNRRSLAFRGGGLAVTGSSGVGGSNSNSWEAQACQDRNLNGNRPDQEEDRDLGAKG
PSQERVEGGGSVSDSTEPEAEEAEDPEGGNWADGNGEDRVGWVAVTVREDESRKGSNWTA
GNGLNSEDRGEAGSGGDGEQETGGARKSWVEMRPQTLLQKHSLFQASWRQEFPWLKFCQE
TGLMSCSWCHNIATKNNDELVKGSRNYKRALLLRHHLSSEHGRNDPTKQELERPGCEDPP
QGTDMETEDYYRNNKPNQDSYCYQLLQELNKQRKGGILCDVNIVVSGEVFRAHKNILVAG
SRYFKTLYCLTKSENTSSSSSSCDQTTTVTDTHLDVAAVAGFSVILDFLYSGNLLLTSQN
AIEVMSVASYLQMTEVVGSCRGFIKEALNISIKQEAPDSVVVDYNKRRTVAKDGAGQVRS
DGSTNKKPGSNFWATSILSKLSIKASGHVQDGDQAGGGSVKEEPSDVELSAGEGCALGSS
SWGCENSSESAENEPPSVPGPGPVFVWNEPAPGAAAGGVVAVKREGQRVQPGSGRRKKQI
TRRFVYNIPPEPEEGFDEGMFIQPSASYPREDFSFLSENAELANQIQYSLLQDSSQQGES
WENGESSDTALNKLKCPHCNYIAKHRRTLKRHLIIHSGVRSFSCDICGKLFTRREHVKRH
SLVHKKDKKYKCMVCKKIFMLAASVGIRHGSRRYGVCVACADSHQATQGGLESLEGFVRE
DHDFEEGGEGEEPDEDMAEEGEEPNDNDQSNWEEGDTGAALENE
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgtctggggagagaaaccgcaggtcgctggcgttcagaggaggtggattagccgtaacc
ggttccagtggtgtcggggggagcaacagtaacagctgggaggcccaggcctgtcaagac
cgaaatttgaacgggaaccgaccagatcaagaagaggatagggatctgggggcaaaagga
ccatcgcaagagagagtggagggtgggggatctgtcagcgatagcacagaaccagaggcg
gaggaggcagaggacccggaagggggcaactgggcagacgggaacggagaggatcgtgtc
ggttgggtggcagtaactgtcagagaagacgagtccaggaaagggagtaactggacagcg
ggtaacggcctgaacagcgaggacagaggcgaagcggggagcgggggagacggggagcag
gaaacgggtggtgccaggaagtcttgggtagaaatgagaccgcagacgttactccaaaaa
cattcgctattccaagcatcatggcgacaggagttcccatggctcaaattttgccaggag
acgggacttatgtcttgctcctggtgtcacaacattgccactaaaaacaacgacgagctg
gtgaaaggcagtcgaaattacaagcgggccttgcttttgagacatcatctgtcttctgag
cacggaaggaatgatccgaccaagcaggagctggagcggcctggctgtgaggaccccccc
caggggacagacatggagacagaagactactacaggaacaacaaacctaaccaggactcc
tactgctaccagctgctgcaggagctaaacaaacaacgcaagggaggaatcctctgtgac
gtcaacatcgttgtgagcggagaggtgttccgggcgcacaagaacatcctcgtagccggg
agccgctactttaagaccctctactgcctgaccaagagcgagaacacttcctcatcatcc
tcgtcatgtgaccagacgaccacagtcaccgacacccacctcgacgtggcggcagtggca
ggtttctcggtcatcctggacttcctgtatagcggtaacctcctgctgaccagtcagaac
gccattgaggtgatgtccgtggcctcctacctccagatgacggaggtggtgggatcgtgt
cgggggttcatcaaggaagccctcaacatcagcatcaagcaggaggcccctgactcagtg
gtggtggattacaacaagaggagaacggtggccaaagacggagctggacaggtgcgctca
gacggcagcaccaacaagaagcctgggagtaacttctgggccaccagcatcctgtccaag
ctgtcaatcaaagccagtggtcatgtccaggatggggaccaggcagggggaggcagtgta
aaggaggagcccagtgatgtggagctgtctgcaggggagggctgcgccctgggaagctcc
agctggggctgtgagaactcgtccgagtctgctgagaacgagcctccgagcgttcctgga
ccggggccggtgttcgtctggaacgagccggctcccggggctgcggcgggcggggtggtg
gcggtgaaaagggaaggtcagagggtgcagccagggagcggacggaggaaaaaacagatc
acgcggcggttcgtctacaacatcccaccagagccagaggaagggtttgatgaggggatg
ttcatccagccctcagcctcctatcccagggaggacttctccttcctctctgagaacgcc
gaactggccaaccagattcagtacagcctcctacaagactcctcccagcaaggagagtcc
tgggagaatggcgagtcgtccgacacggccctgaataagctcaagtgtccccattgtaac
tacatcgccaagcaccggagaacactaaagaggcacctcattatccactctggtgtccgc
tccttcagctgtgatatctgtggcaagctgttcacccgcagagagcacgtcaagagacat
tccctggtgcacaaaaaggacaagaagtacaagtgcatggtgtgtaaaaagatcttcatg
ctggcggccagcgtggggatccggcatggctcgcggcgctacggcgtttgtgtggcatgt
gcggactcccaccaggccacacaggggggcctggagtccctggagggcttcgtccgtgaa
gaccatgacttcgaggagggaggagagggggaggagcctgacgaggacatggctgaggag
ggggaggagcctaacgacaacgaccaatccaactgggaggagggcgacactggtgctgcc
cttgagaacgagtag
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