Salvelinus namaycush (lake trout): 120022232
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Entry
120022232 CDS
T07522
Name
(RefSeq) transformer-2 protein homolog alpha-like
KO
K12897
transformer-2 protein
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120022232
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
snh01009
]
120022232
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
snh03041
]
120022232
Protein phosphatases and associated proteins [BR:
snh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120022232
Spliceosome [BR:
snh03041
]
Common components
Common spliceosomal components
SR proteins
120022232
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FMP27-BLTP2_C
Spem1
Motif
Other DBs
NCBI-GeneID:
120022232
NCBI-ProteinID:
XP_038822043
UniProt:
A0A8U0PBD9
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Position
Sna27:13692724..13698800
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AA seq
315 aa
AA seq
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MSDIEDGNFDGRGSRSPSKSDRGSPVRVKSESRSGSASPSRAAKHSESRSRSKSRSHSRR
HSNRRYSRSRSPSNRKKSRSYSPEYRKKKSQSESPNRRHTSSRSHDFRKETFGQGAGGDE
DARANPDPNQCLGVFGLSLYTTEKDLREVFGRYGPLAGVNVVYDQRTGRSRGFAFVYFKR
IDDSKEAMERANGMELDGRRIRVDFSITKRAHTPTPGIYMGRPTQNDGGGGGERNSGSSG
GGRRGRDSYDRYDDRRGGGYDRGYDRGYDRGDRGGDRGYDRYDEYDKYSRRRSPSPYYSR
YRSRSRSRSYSPRRY
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacattgaggatggaaacttcgatggacgaggctctcgctccccatccaaatcg
gaccgtggcagtcctgtccgggtcaagtcagagagcagatccggctccgcaagcccatcc
agggccgccaaacactcagagtctcggtcccgctctaagtccaggtctcactctcggagg
cactccaaccgcaggtacagccgctctcgctccccctccaaccggaagaagtcccgttcc
tacagcccggaataccggaagaagaagagccagagcgagtcacctaaccgccgccatacc
agcagcagaagccatgacttcagaaaagagacattcggtcagggagcaggaggtgatgag
gatgccagggcgaaccctgaccccaaccagtgcctgggggtgtttgggctgagcctgtac
accacggagaaggacctgagggaagtgtttggccggtatggcccgctggccggggttaac
gtggtgtatgaccagcgcaccgggcgctcccgcggctttgcatttgtctacttcaagagg
attgacgactccaaggaggcgatggagcgtgccaacggtatggagctggacgggagacgt
atcagagtggacttttccattaccaagagggcccacacccctacgcctggcatctacatg
ggccgacccacacaaaatgatggtggaggtggaggagagcgaaacagtggcagcagtggt
ggagggaggaggggtcgggactcgtacgaccgatacgacgatcgacggggcggcggctac
gaccgtggatatgaccgtggatacgatcggggagaccgaggtggagaccggggatatgac
agatatgacgagtacgacaagtacagtcgcaggcgctctccctctccctactacagtcga
tacaggtcacgttccaggtctcgctcatacagcccacgacgatactaa
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