Salvelinus namaycush (lake trout): 120022254
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Entry
120022254 CDS
T07522
Name
(RefSeq) biogenesis of lysosome-related organelles complex 1 subunit 4-like isoform X1
KO
K08366
biogenesis of lysosome-related organelles complex 1 subunit 4
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120022254
Membrane trafficking [BR:
snh04131
]
Endosome - Lysosome transport
Others
BLOC-1 complex
120022254
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Paralog
Gene cluster
GFIT
Motif
Pfam:
BLOC1_2
DUF4200
SAM_KSR1
Nt_Gln_amidase
Motif
Other DBs
NCBI-GeneID:
120022254
NCBI-ProteinID:
XP_038822067
UniProt:
A0A8U0PD02
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All DBs
Position
Sna27:complement(23282873..23287591)
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AA seq
232 aa
AA seq
DB search
MEPRMENRVDVLSPLEESSAEVSRDSGIVSQSVSSLSMLSEALSNGTVSQSPSFDPAVLR
SPSFNSEEPDTDPDHNEEDEILRHTALSYSSYIRDTAEDEILGLEKSLEEMLTRVDEFVG
MLDMIRNDTSQIVNENLPQIHRKSEDMRQIYRKIDKLDVFVKMVGANVNVMEEHVTQAEK
EQGTLPGAFRKIFRTISVPSFLNKPASPRRQQHQELPPVLRTDDYFTPHPGH
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atggaacctaggatggaaaatagggtagatgttctctccccgctggaggagtccagtgcc
gaggtgagtcgggacagtggcatcgtgtcgcagagtgtgagcagtttatccatgttgagc
gaggccctaagcaatggtaccgtgtcgcaaagccccagcttcgacccagcagtcttgcgg
agtccgagcttcaactccgaggaacccgacacggacccagaccacaacgaggaggatgag
atactgagacacactgccctcagttactcctcttacatcagagatacagctgaagacgag
atcctgggtttggagaaaagtctggaggaaatgcttactagggtggatgaatttgttgga
atgcttgacatgatccgcaacgacacatcacagattgtcaacgagaacctacctcaaata
catagaaaatcagaagatatgagacaaatatacagaaagattgacaagttggatgtgttt
gtgaagatggtgggtgccaatgtgaatgtcatggaggagcatgtcactcaggcagagaag
gaacaaggaaccctgccgggcgccttcagaaagatcttccgtaccattagtgtcccgagc
tttctaaataaaccagccagccccagaaggcagcagcatcaggagcttcccccagtgttg
agaacagatgattatttcaccccacacccaggacactga
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