Salvelinus namaycush (lake trout): 120022336
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Entry
120022336 CDS
T07522
Name
(RefSeq) zinc finger and BTB domain-containing protein 22-like
KO
K10502
zinc finger and BTB domain-containing protein 22
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120022336
04121 Ubiquitin system [BR:
snh04121
]
120022336
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
120022336
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
120022336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
zf-H2C2_2
zf-C2H2
zf-C2H2_jaz
C2CH-4th_BIRD-IDD
zf-C2H2_4
Zn_ribbon_SprT
DUF5810
zf-Di19
DUF2321
Motif
Other DBs
NCBI-GeneID:
120022336
NCBI-ProteinID:
XP_038822157
UniProt:
A0A8U0PD61
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All DBs
Position
Sna27:complement(30505808..30508206)
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AA seq
686 aa
AA seq
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MHSLSMGQGCSSSGVPSGSVVQVCFPSSQASVLDSLNRQREEGQLCDLSIQVQGKVFKAH
RCVLAASSPYFHDQVLLKNMSTVSIPAVMDLLAFESVLSCAYTGQLRMLREDIVNYLTVG
SVLQMWHIVDKCTELLKEGRVVGSASQGVIGGVQGNPRCSSSESSLAGGSNTQAAPHPPS
RPSLSESQSPSSTNYFSPRDVNSGGGAAAAGAAGQEGVNATPSYCTPSGAEEAFLIEEED
EEEEEELMYHRKQGSSRRKRTTSVSDQEVGVSDRFGVSSYQDGDASPLQKRPTYSQPSIM
PRKQWVVVKTEGPQDDDLIVVSGEEGPDEEEERELEMLRERERTFNISNVRTLSGELRSR
ADHEMETQMDYCQSSEDYLKFDSGLMDQTPPQHLHDSAGQSGGRVVSALLGQVQSAAAAR
AQLFPIDMQGNQILMYSQSSLDSSQPIGIGGGMAGAPFKGTNLEHGAVHLSAQGGLGGGI
DGLDGGGGGGGSGKVFMCHCGKTFTHKSMRDRHINMHLDLRPFNCPVCAKKFKMKHHLTE
HMKTHTGLKPYDCHGCGKKFMWRDSYMRHRSHCEGRGGAAGRSEDGGGSDRTDGVSPQHL
PLSASEAGQDAVGCRTGISVLSPHHSSTGSSSNAVSCLTMVGAGARLGVNSPSVLQGQGS
VFGLGVSQGGCEEEVCEVGDNDTSVT
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgcattctctgtcaatggggcagggctgtagcagctcaggtgtcccctctggctcggtg
gttcaggtgtgcttccccagctcccaggcgtctgtactggacagcctgaatcggcagcgc
gaggagggccagctctgtgacctctccatccaggtccaggggaaggtgttcaaggcccac
cgctgcgtgctagctgcatcctcaccctactttcacgaccaggtgctcttgaagaacatg
tccactgtctccatccctgccgtcatggacctgctggcgttcgagagtgtcctgagctgc
gcctacacgggccagctgcgcatgctccgcgaagacatcgtcaactacctcaccgtgggc
agcgtgctgcagatgtggcacatcgtggacaagtgcacagagctcctcaaagaggggcgg
gtggtgggtagcgcatcccagggggtcattggaggagtgcaggggaaccctagatgcagt
agcagtgaaagctccctagcaggtggaagcaacacccaggcagcccctcaccctcccagc
cgtccgtccctgagtgagagccagtctcccagcagcaccaactacttcagccccagagat
gtcaactccggagggggagcagcggcagctggagctgcagggcaggaaggcgtgaacgcc
actcccagctactgcaccccttctggggccgaggaggccttcctgatcgaagaggaggat
gaagaagaggaagaagagctcatgtaccataggaagcaagggagcagcaggaggaaacgg
acaacctctgtctcggaccaagaggttggagtcagcgaccgcttcggagtgtcgtcctac
caagacggggacgcctcccctctccagaagcgacccacctacagccagcccagcatcatg
ccccggaagcagtgggtggtggtgaagacggagggaccccaggacgatgacctgattgtg
gtgtcaggggaggaagggccagatgaggaagaggagagagagttggaaatgttgagggag
agggagaggacgttcaacatatccaacgtcaggactctgtctggagagctgaggagcaga
gcggaccatgagatggagacacagatggattactgccagtcttctgaagactacctcaag
tttgacagtggtttgatggaccagactcccccacagcaccttcatgacagcgctggtcag
agtggtggcagagtcgtttctgccctactcggccaagtccagtctgctgctgctgctaga
gctcagctctttcccatagacatgcaaggcaaccagatcctcatgtacagccaatcctct
ttagactcctctcaacccataggaataggaggtggtatggctggggcaccatttaaaggg
acaaacttagagcatggagcggtccatttgtcagcacaggggggtttgggcggtggcata
gatggactggacgggggtggtggtggcgggggttcagggaaggtgttcatgtgccactgt
ggaaagaccttcacccacaagagcatgcgtgaccgccacatcaacatgcacctggacctg
cggcctttcaactgccccgtctgcgccaagaagttcaagatgaagcaccacctgacggag
cacatgaagacccacacggggctcaagccctacgactgccacggctgcggcaagaagttc
atgtggcgcgacagctacatgcggcaccgctcccactgcgagggacgtggcggggcggct
ggcaggagcgaggatgggggagggtccgaccgcactgatggcgtctcccctcagcatctc
cccctctcggccagcgaggccggtcaagatgccgttggttgcaggactgggatctctgtc
ttgtcgccacatcattccagtacaggtagcagcagcaatgccgtctcgtgcctgaccatg
gtcggtgcaggagcgcgcttaggggtcaactctccaagcgtgttgcagggtcaaggttct
gtgtttggtctgggggtcagccaaggtgggtgtgaggaggaagtgtgtgaggttggtgat
aatgatactagtgtcacttga
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