Salvelinus namaycush (lake trout): 120022348
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Entry
120022348 CDS
T07522
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2D-like
KO
K05212
glutamate receptor ionotropic, NMDA 2D
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04020
Calcium signaling pathway
snh04080
Neuroactive ligand-receptor interaction
snh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
120022348
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120022348
04082 Neuroactive ligand signaling
120022348
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120022348
Ion channels [BR:
snh04040
]
Ligand-gated channels
Glutamate (ionotropic)
120022348
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Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
AbpE_bact
Motif
Other DBs
NCBI-GeneID:
120022348
NCBI-ProteinID:
XP_038822169
UniProt:
A0A8U0PE53
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All DBs
Position
27:complement(31687064..31733352)
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AA seq
1809 aa
AA seq
DB search
MAAKPALSLLLAVLACTGPARSSPPLLLRPRERERDLGVVNIAVVHSGYSLLPETAATGG
MGATSGPGGPQGRGASSSLAMVAASAPLASASAALVGGSVMTQYGPANVIYLTVNESSPA
SLLLQLCELLATTPLQGLVFEEERPPPPDQAPLAPMLEFVSAQTGVPVVAVGGGAGLGRE
PQESGSIYLQFTCSTAMQLDVVFEVLEEFDWTSFSVVATRHHGYEDFLAMVEALTDGSFI
GWEKKGVVMLNVTDDPGGTRSSRLLKENEAQVRLLYCSQEEAALIFKAAWASGQAGHSHM
WFAVGPALSGLGLEGLPKALFAVRPQGWRDEPRRRIAKGVSVLTHGAMALRKEYGWARGP
HYFAGNCQTDGNQTQRVPDRIRFFSNITLSGRDYSFNSDGYLSNPVLDVISYTEGKGWEE
VGTWQNGVLDLIIQPFSRYGSFLKPLDDTQHLKVVTLEERPFVIVEPADPGTNSCIRDSV
PCRLPLNTTNVPVDEKSSKHCCKGFCIDVLKRLAKIVGFSYDLYLVTNGRHGKRGSDGQW
NGMVGEVVYKRADMAIGSLTVNKERSEAVEFSVPFVETGISVMVSRSNGTVSPSAFLEPY
SPAVWVMMFVMCLSVVAVTVFIFEFFSPVGYNRSLQSAKKTGGSKFTIGKSIWLLWALVF
NNSVPVENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEEYIDTVSGLSDKKFQQP
TEQYPPLRFGTVPNGSTEENIRSNYANMHNFMIRNNQKGVEEAIDNLKTGKLDAFIYDAA
VLNYMARKDEGCKVMTIGSGKVFATTGYGIALHKNTRWKRPVDLALLQLVGDDEIDMLER
LWLSGICHNDKIEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEHLVYWKIRHCLGRSG
GMDFLLALSRGMYSCCKFEDETVSGGLRNTLPLYQSVPTMPPPPQSHISAAVTCNTTLAM
VQQQQRHHHQQQQQHEQQHEQQQQQQQQQQQQAYSMLPAGSPPTTGYSAMALGPSNSPLL
EGPMPCSTFLPRHDRRLAVVDRWNRPKPSTDKPIGGSGGIPDMAQFQQGLPPHWAGGASG
RDGSLDEYKRYYGPIDPEGLGANADPQTGGSQTPKTNQRGTKSSGMPRLPSKGPPTGHLM
SKPALPLPSSPHPPPFWRRGSLPKRKGSGGPLYENILPLGRRGGGRYGARDGGGRRGRRP
PLLPLPVPVASPALTTPTTPSHSALYTSSSCSSTSSSSSSSSSSVSLSRSNSPSSSTITY
TSSQSFKYRAGSRDVEDVYDSDELIEESSLLLGRRKGKSRRMSSRSLPCSPPPPPVPPRK
PRLQYERERAGSQLAQLQEWWTSWGERERLRGTGTRAEGKEEKRHHKDRERERKRRKKGR
KKKKREEKERERERKRHKVKKKKKEEKVKRRDRGKRSEHEEGGGEQRGQLKAITQEAYSS
YPALRRDSMRKKSEGFIRSYGWDIPRDEDRRDSEDKEIDDGEDTRGKERHRSPYSRHRHA
GRPSSSSKQYQSPRKPSTAVKFWGAGNPSSEIPSSAFLPLIPLSSRRRSKGSDREALGKE
GETRPLLGRNERVEVHSKEGLSFHEWDSEDDDEDSEEERRKVEQEKRHERRRRTASESER
ESDKMVGIYSDDDGSSGEFGKFERYWEGHEGRAVGGIGGGGWFFGTYPAREKAGSINSRD
GSLLGRGEGWGGAGGAGEGGWGSGRIGGTQWPPPPLTPPAPRRYWSVDKLPVKEEKKEKR
KDKDKGRVSSTPGAPQPSSMASASAKLLYQRLRSVPQPQRLQSPHLPLKAKSLCSRRGSA
HFSSVESEV
NT seq
5430 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaagcccgccctctccctcctgttggccgtgttggcctgcacggggcccgcc
cgctcctcccctcccctcttgctccgcccccgggagcgagagagggacttgggtgtagtc
aacatcgctgtggtccactcgggctactccctgctcccggagacggccgctactggggga
atgggcgccacgagcgggccggggggtcctcaggggagaggggcctcgtcgtcattggct
atggtggcggcgtctgcgccactggcgtctgcgtcagcggctctggtgggcggtagcgtg
atgacgcagtatggcccggccaacgtgatctacctgacggtgaacgagagcagcccggcg
agccttctgctgcagctgtgtgagctgctggccactacgccgctccaggggctggtgttc
gaggaggagaggcccccgccacccgaccaggctcccctggcccccatgctggagtttgtc
tcggcccagaccggagtgcccgttgtggccgtgggaggaggggccggactgggcagggag
ccacaggaaagcggctccatctacctccagttcacctgctctacagccatgcagctggac
gtggtctttgaggtgctggaagagttcgactggacctccttctccgtggtggccacgcgt
caccacggttatgaggacttcctggccatggtggaggcactgacggacggatccttcatc
ggctgggagaagaagggagtggtcatgctcaacgtcaccgacgacccgggagggacacgc
tcgagcaggctgctcaaggagaacgaggcgcaggtgcgtctcctctactgctcccaggag
gaggcggcgctgatcttcaaggcggcctgggcctcgggtcaggccggacactcccacatg
tggttcgccgtggggccagccctgtccggccttggcctggagggcctccccaaggccctg
ttcgcagtgcggccgcagggctggagagacgagccccgccggaggatcgccaaaggggtg
tctgtgctgacccacggagccatggctctgaggaaggagtacggctgggcccgagggcca
cactacttcgcaggcaactgccagacagatggcaaccagacgcagagggtgccagacagg
atcaggttcttcagtaacattacgctgagtggccgggactactcgttcaacagtgacggc
tacctgtccaatccagtgctggatgtgatttcctacaccgaggggaaaggctgggaggag
gttggcacgtggcagaacggtgttctggatctcatcatccagcccttttcacgctacggc
tccttcctcaagccgctggatgacacccagcacctcaaggtggtcaccctggaggagagg
ccctttgtcattgtggagccagccgacccaggcaccaactcctgcatccgggactcggtg
ccctgcagactaccgctcaacaccaccaatgtgccggtggatgagaaatcgtcgaagcac
tgctgcaaaggcttctgcattgacgtcctcaagcgattggccaaaatagtgggcttctcc
tatgacctctacctggtgaccaatggcagacacgggaagagggggagtgatgggcagtgg
aatggcatggtcggggaggtggtttataaacgggccgacatggccattggctccctgacc
gtcaacaaggagaggtcggaggctgtggagttctccgtgcccttcgtggagacaggcatc
agcgtcatggtctcccgtagcaatggcaccgtctcgccgtcggccttccttgagccatac
agcccagctgtgtgggtgatgatgttcgtcatgtgcctctccgtggtcgctgtcacagtc
tttattttcgagttcttcagtcccgtcggctacaaccgcagcctgcaaagtgcaaagaag
acagggggctctaaattcaccatagggaagtctatctggctgctgtgggctctggtcttc
aataactcagtgcctgtggaaaaccccagaggaaccaccagtaagatcatggtgctggtg
tgggccttcttcgctgtcatcttcctggcctcctacacggccaacctggcagccttcatg
atccaggaggagtacatcgacactgtgtctggcctcagcgacaagaagttccagcagccc
actgagcagtaccccccactccgatttggcaccgtccccaacgggagcacggaggagaac
atccgcagcaactacgccaacatgcacaacttcatgatccgcaacaaccagaaaggcgtg
gaggaggccatcgacaacctcaagactggtaaactagatgccttcatctatgatgcggct
gtgctaaactacatggcgaggaaagacgagggctgtaaggtgatgaccattggctcgggc
aaggtgttcgccaccacgggctacggcatcgccctgcataagaacacccgctggaaacgc
cccgtggacttggccctcctgcagctggtgggagacgatgagatcgacatgctcgagcgc
ctgtggctctcggggatctgtcacaacgacaagattgaggtgatgagctccaagctggac
atcgacaacatggcgggggtcttctacatgctgctggtggctatggggctcagtctgctg
gttttcgcctgggagcacctggtgtactggaagatcaggcactgcctgggccgctccggt
ggcatggacttcctattggccctcagcaggggtatgtacagttgctgcaagtttgaagat
gaaaccgtctctggaggcctcagaaacacacttcccctatatcagagtgttcccacaatg
ccacctccaccccaatcccacatctcagcggctgtaacctgtaacactactcttgccatg
gtgcagcagcagcagaggcatcatcaccagcagcaacagcagcatgagcagcagcatgag
cagcagcagcagcagcagcagcagcagcagcagcaagcatacagcatgcttcctgctgga
tctcctccaactactgggtactctgcaatggcccttgggccatcaaacagtccccttttg
gagggtcccatgccgtgctccacttttctgcctcgccatgaccgcagattggctgtggta
gaccgctggaaccgtcccaagcccagcacggacaagccgattggtggcagcggtgggatc
ccagacatggcacagtttcaacagggcttgccccctcattgggctgggggagccagtgga
agggacgggagtctggatgaatacaagcgatactatggcccgatcgatccagagggctta
ggggcaaatgctgacccacaaacaggtggctctcaaacccccaaaacgaaccagaggggg
acaaagtcctcaggaatgcctagactaccttctaaaggaccgcccactgggcacttaatg
tccaagcccgctctaccgctcccctcatccccacatccaccgccattttggagaagaggc
agcctcccgaaaagaaagggctccggggggcctctgtatgagaacatcctccccttgggg
agaagagggggagggcggtacggagcaagggatggaggtggcaggcgaggccgtcgccct
cccctactcccattgcctgtccctgtcgcgtcccctgccctcactacccctaccactccc
tctcattccgccctctacacctccagctcctgctcctccacctcatccagttcatcctcg
tcctcatcctccgtctccctctcacggtccaactcaccctcatcctccaccatcacatac
acatcgtcccagagttttaagtacagggctggcagtagggatgtcgaggacgtttatgac
tctgatgagctgatagaggagtctagcctcctgctaggacggagaaagggcaaatcccga
cgcatgtcctctcgctcactgccttgcagtccaccccctccgcctgtaccaccccgcaag
cctcgtctacagtatgagagagagagggctgggagccagctagcccagctgcaggagtgg
tggacctcctggggcgagagagaaagacttagaggaacaggaaccagggccgaggggaag
gaggagaaacggcatcacaaagacagagaaagggagagaaagagaaggaagaaaggccgg
aagaaaaaaaagagagaggagaaggagagagagcgggagcgcaagcggcataaagtgaag
aagaagaagaaagaggagaaggtgaagagaagagatcggggcaagcgatcagagcacgag
gagggaggtggtgaacagagagggcagctcaaagcgataacgcaagaggcctactcctcc
tacccggctctgaggcgtgactctatgaggaaaaagagtgaaggttttatcagaagttac
ggatgggatattccaagggatgaagacaggagagatagcgaggacaaggaaatagatgat
ggagaggacactagaggcaaggaaaggcacagaagtccttactctcgccacaggcatgca
ggtaggccttccagttccagcaagcagtaccagagccccagaaaaccctcaaccgctgtc
aaattctggggagcgggaaacccatcgtcagagattccttcatctgcatttctgccactg
atccctctctcgtccaggcgcaggagtaagggttcagatagagaggccctagggaaagaa
ggggagacgcgccccctgttgggcaggaacgagagagtggaggttcactccaaagaaggt
ttgtcgtttcatgagtgggattccgaagatgatgatgaagattccgaggaggaacggaga
aaagtggagcaagagaagagacacgagagacgacgaaggaccgcatcagagtccgaaagg
gaaagtgataagatggtgggcatctactcagacgacgacggctcctcgggagaatttgga
aagttcgaaaggtactgggagggtcatgagggtagagcggttgggggaataggaggggga
ggttggtttttcggcacttatcccgccagagaaaaagccggcagcataaacagtagggat
ggctcgttattgggccgtggggagggatggggcggagcagggggagcaggggaaggtggc
tggggttcagggaggataggtggtacacagtggcctccacctccattgacaccaccagct
cctcgaagatactggtccgtggacaagcttcccgtgaaggaggagaagaaagagaaacgg
aaggacaaggacaaagggcgagtatcctccaccccaggcgccccccagccgtcttctatg
gcttctgctagtgccaaactcctgtaccagagactgcgctcagtgccccagccccaaagg
ttacagtcacctcacctgcccctcaaggccaagagcctctgctcacggagggggtccgca
cacttctccagtgtggagagcgaggtgtga
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integrated database retrieval system
