Salvelinus namaycush (lake trout): 120022477
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Entry
120022477 CDS
T07522
Name
(RefSeq) protein Jumonji-like isoform X1
KO
K11478
protein Jumonji
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
120022477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120022477
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
120022477
Polycomb repressive complex (PRC) and associated proteins
PRC2.2
120022477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
ARID
JmjN
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
120022477
NCBI-ProteinID:
XP_038822323
UniProt:
A0A8U0PD25
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Position
Sna27:23483018..23575450
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AA seq
1293 aa
AA seq
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MSKERPKRNIIQKKYDDIDGIPWSEERDVRKVLYLSLKEFKTAQKRQLGDGIGDGTKYTN
GSHARGQLNGSGQKGHNADGSRFQSTDGSSEYSEDGPAKKRPRLQAQRKFAQSQPNSPST
TPVKVSDTALPAPSAHIRDISRRKPKTEDFLTFLCLRGYSSWPNEGSSALPSNMAYFGSS
QDEDALDDEEEYEDVKPDVSVASTSCQSTPRKGKPQGKHTVNGHVLNGPSKAPRDSPKPR
GKEWVQVRERSERAEARREHALSQLEATARGHTLPRGHTTNGLPHRRAAEELCKQVSKVN
GVTRASQTGMHTAGAKKTKDFRLPSKTVNGLVTYTKGKRELVKKTKLNKRKHSTAATHRA
HSNNRHHNHLQRHQRLPLSNSGKAQNSKAKTSKQVLLSNGVHKVTNGGGVRLNGHLCAKQ
EVGRQGREGLRNSKRRLEVAVAAIGAVADSQGKLVVLETNRNRKKTKQNHSSPLETRSKK
ACQGKASVPNGHIVMETTPPPSLLAPPPPSTPLANPEPGRQRPKRASAGKLMFIRQAQHR
AQAASNPNHTLNRSTTSESPGHTPGHTPHKPAEPRPDREWEREKERAERSRASWAALGEA
PEFSPTQREFQDPLVYLDSVREGAEPCGLCRVVPPADWRPECKLNDEMRFVTQVQRIHKL
GRRWGPNVQRLACIKKHLKSQGITMEDPPLIGGCEVDLARFFQLINDMGGMQQVMDLKKW
SKLADLLRIPKSAQDRLAKLQESYLQYLLSYDSLSLEEHRRLEREVLQEKEGLERRRGPL
EGHTDRSLTLPRYEPKNGLAGSLVQHSNGQLCSRLKELDSQQLKVGRRRLFSQEKRNGEM
TQQEEDEDEEKGVLSDQHKCIYKGKSVSLTNFFRIARNTMIMCFNKEPGAAEVEQEYWRI
VEQRHCHVAVHYGKVDTNTHGSGFPVGKSEPFSKHGWNLTVLPNNSGSILRHLGAVPGVT
IPWLNIGMVFSTSCWSRDQNRLPYIDYLHTGADCIWYSVPAEEKVKLDKVVHTLLQANGT
PGLEMLEKNIMISPEVLCREGIKVHRTVQQSGQFVVCFPGTFVSKVCCGYSVSETVHFAT
PQWMNLGYEAAKDLKCRHIAKPFSMEKLLYQIATAESKRENGHILTTISALLKDLRNIEM
RQRQELYEAGLLSSARYGTHDNSLVPGDGRKKPRKWLALESSERRCQTCQHLCYLSMVVQ
ENENVVFCLECALRYVENHKSCRGLKMMYRYDEEQINSLVKQVCGKVLGKTTEKCNGASP
IKPPPKRGPRKRETVEVSLSRLSSSHLSPAAVT
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggaaagacccaagaggaatatcatccaaaagaaatacgatgatatcgatggg
atcccctggtcagaggagagggatgtgaggaaggtgctctatctctccctgaaggagttc
aagactgctcagaaaaggcagctcggagacggcatcggagatggaaccaaatacactaat
ggttcccatgcccgcgggcagctcaatggctcagggcagaagggccacaatgctgacggg
tcacggttccagagcaccgacggcagcagcgagtactctgaggatggccctgccaagaag
aggcccagactgcaagcacagaggaagtttgcccagtctcagcccaactctcccagcacc
accccggtcaaggtgtctgataccgccctgcccgcaccctccgctcacatcagagacatc
tccagacgaaaacccaagaccgaagatttcctcaccttcctctgcctgagaggttactcc
tcgtggccaaatgaagggtcgtcagcgttgcccagtaacatggcgtactttgggagctct
caggatgaagatgcgctggatgatgaagaggagtacgaggatgtgaagccagatgtcagc
gtggcatctacttcctgtcagtccacgcccaggaagggcaaaccccaagggaaacacacc
gtcaatggccacgtgttgaacggccccagcaaggcgccccgagacagccccaagcccaga
gggaaggagtgggtgcaggtgagagagcgcagtgagagggccgaggcccggagggagcat
gccctcagccagctagaggctacagccaggggccacaccctacccaggggccacactacc
aacggactgccccacaggagggccgcggaggagctctgcaagcaggtctctaaagtgaac
ggagtcacacgggcgtcccagacaggcatgcacacggccggtgccaaaaaaacgaaagac
ttcagactgccgtccaaaactgtgaatggcctcgtcacatacaccaaaggaaaacgagaa
ctggtgaagaaaaccaaactgaacaagcgcaaacacagcactgctgctacccatagagcc
catagcaacaatcgccaccacaaccacctccagcgccaccagcgactccccctctccaac
tcaggaaaagcccagaatagcaaagcaaaaacaagcaaacaggtgctattatccaatggg
gtgcacaaggtgaccaacgggggcggagtgcgcctcaacgggcacctctgtgccaagcag
gaggtgggcaggcaggggcgtgagggactgaggaactccaagcggaggctggaggtggcg
gtggctgccatcggggcggtggctgactcccagggtaagttggtcgtcctggagactaac
cgcaaccgtaagaagaccaaacagaaccatagcagccctctggagacacgcagtaagaaa
gcatgtcagggcaaggcctcggtccctaacggacacatcgtcatggaaaccacccctccc
ccctccctgctagccccaccccctccctccacaccactagccaatccagagccagggcgt
cagcggcccaagcgagcgtcagccggcaagttgatgttcatcagacaagcacagcaccgg
gcgcaggctgcctctaaccctaaccacacccttaaccgctcaactacctcagagtcccct
ggccacacccccgggcatacccctcacaaaccagcagagccccgacctgacagggagtgg
gaaagggagaaggagagggcggagaggagcagggcgagctgggcagcgttgggtgaggca
ccagagttcagtcccacccagcgggagttccaggaccccctggtgtacctggactctgtg
cgggagggggcggagccctgcggactgtgtcgggtggttcccccggctgactggcgccca
gagtgcaaactgaacgatgagatgcgctttgtgacccaggtgcagcgcatccacaagcta
ggccgtcgctggggccctaacgtacagaggctagcctgcatcaagaagcacctcaaatct
cagggcatcaccatggaagacccaccactcatcggtggctgcgaggtggacctggctcgg
ttcttccagctgattaatgacatgggcggcatgcagcaggttatggacctgaagaagtgg
agtaaactggctgatctgctgcggatccccaagtcagcgcaggaccgtctagccaagctg
caggagtcctacctccagtacctgctgtcctatgactctctgtccctagaggagcaccga
cgcctggagagggaggtgctgcaggagaaggagggcctggagcgtcgcagggggcccctg
gagggccacacagacaggagcctgaccctgccacgctacgagcccaagaacgggctggcc
ggcagtctggtgcagcacagcaacggtcagctgtgcagccggctgaaggagctggacagt
cagcagctcaaggtgggacgccggaggctgttctctcaggaaaagaggaatggggaaatg
acacagcaggaggaagatgaggatgaggagaagggggttctcagtgaccagcacaagtgt
atttacaaggggaaatctgtatctctcaccaacttcttcaggatagccaggaacaccatg
atcatgtgctttaacaaagagcctggggctgctgaggtcgagcaggaatactggaggata
gtggagcagaggcactgccatgtggcagtgcattatgggaaagtggacaccaacacacac
ggaagtggcttccccgtgggaaagtcagagccattttctaaacatggatggaacctcact
gtcctccctaataattctggatccattctgcggcatcttggagctgtgcccggggtcacc
attccttggctgaacattggcatggtcttttctacctcatgctggtctcgagaccaaaac
cgccttccatacattgattacttacacactggtgctgactgcatttggtattctgttcct
gctgaggagaaggtgaagcttgacaaggtggttcacacactgctgcaggccaacgggacc
cccgggctggagatgctggagaagaacatcatgatctctccagaggtgctttgtcgagag
ggtatcaaggtccaccgcaccgtccagcagagcggtcagtttgtggtctgcttccccggg
acctttgtgtccaaggtctgctgtggctacagtgtgtcggaaaccgtgcattttgccacc
ccccagtggatgaacctgggatatgaggctgctaaggacctgaaatgccggcacatagcc
aaacccttctccatggagaagttactctatcagatcgccacggccgaatccaaacgcgag
aacgggcacattctgactacgatctccgctcttctcaaagacctcaggaacatagagatg
agacaacggcaggaactgtacgaggcagggcttctgtcctctgcccgctacggaacacat
gataacagcctggtgcccggtgatggacgcaagaaacccaggaagtggctggcgctggag
tcgtcagagagacgctgccagacttgccaacacctctgctacctgtccatggtggtccag
gagaatgaaaacgtagtcttctgtttggagtgtgctttgagatacgtggagaatcacaag
tcctgcagaggcctcaagatgatgtatcgttacgatgaggagcagatcaacagcttggtg
aagcaggtgtgtggcaaggtcctggggaagacgactgagaaatgtaacggtgcaagcccc
atcaaaccaccacctaaacgcggaccccggaagagagagaccgtggaggtgtccctgtcc
cgcctctcctcctcccacctgtctcccgcagccgtcacatga
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