KEGG   Salvelinus namaycush (lake trout): 120022543
Entry
120022543         CDS       T07522                                 
Symbol
sem1
Name
(RefSeq) 26S proteasome complex subunit SEM1
  KO
K10881  26 proteasome complex subunit DSS1
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh03050  Proteasome
snh03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:snh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    120022543 (sem1)
  09124 Replication and repair
   03440 Homologous recombination
    120022543 (sem1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:snh03019]
    120022543 (sem1)
   04131 Membrane trafficking [BR:snh04131]
    120022543 (sem1)
   03051 Proteasome [BR:snh03051]
    120022543 (sem1)
   03400 DNA repair and recombination proteins [BR:snh03400]
    120022543 (sem1)
Messenger RNA biogenesis [BR:snh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     120022543 (sem1)
Membrane trafficking [BR:snh04131]
 Exocytosis
  Tethering complex
   Exocyst complex assembly proteins
    120022543 (sem1)
Proteasome [BR:snh03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    non-ATPase subunits
     120022543 (sem1)
DNA repair and recombination proteins [BR:snh03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     120022543 (sem1)
SSDB
Motif
Pfam: DSS1_SEM1
Other DBs
NCBI-GeneID: 120022543
NCBI-ProteinID: XP_038822421
UniProt: A0A8U0TNU4
LinkDB
Position
Sna27:complement(11303379..11307941)
AA seq 71 aa
MSDKKQTVDLGLLEEDDEFEEFPAEDWTGLDEDEDAHVWEDNWDDDNVEDDFSNQLRAEL
EKHGYKMETSQ
NT seq 216 nt   +upstreamnt  +downstreamnt
atgtctgacaagaaacagactgtagatttgggattattagaggaggacgatgagtttgaa
gaattcccagccgaggattggactgggttggatgaggatgaagatgcccacgtgtgggaa
gacaactgggatgatgacaatgtagaggacgacttctctaatcaactaagagcggagctg
gagaaacatgggtacaagatggagacgtcgcagtag

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