Salvelinus namaycush (lake trout): 120022550
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Entry
120022550 CDS
T07522
Name
(RefSeq) zinc fingers and homeoboxes protein 1-like
KO
K24879
zinc fingers and homeoboxes protein 1
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120022550
Transcription factors [BR:
snh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
120022550
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
zf_C2H2_ZHX
Homez
zf-H2C2_5
zf-C2H2_7th_ZNF462
zf-C2H2_ZNF462_11
Motif
Other DBs
NCBI-GeneID:
120022550
NCBI-ProteinID:
XP_038822429
UniProt:
A0A8U0TMR3
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Position
Sna27:complement(29825204..29834208)
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AA seq
884 aa
AA seq
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MASRRKSTTPCMVPPVQMVDSDPDMEVVTEGEAEGAANCPVENSTESIPNEEDSQAIDHF
IKTMDSSTAEGGYECKYCSFQTSQLNMFTLHVDTEHPNIVLNSSYVCVECDFHTKRYDAL
LEHNARHHPGEDNFTRTMVKRNNQTIFEQRVNDLTFDGSFVKVEEDEDTSCKGIALSKTP
IMKIKSRAEAKKFTGSHKMADYSVIKVESDGEEETEEVVPPPVTPNVVAVSTPLTIQPIQ
QSIMINSPNVLQIKTSNSATMLPPGTLAQVLSALQNQQTSQTQLLIPVSSIPTYNGAMDN
NVLLVSAYNRFPYPSVSEIMGLAAQTKFTEEQIKVWFSAQRLKHGVSWTPEEVEEARRKK
FNGSVQAVPQTITVIPANFATAANGLQSIFQTCQIVGQPGMVLTQVGGGNAVPVASPITL
AVAGVPNPRTSVSKVPEPSTSETASPLSPDSLGARPKKSKEQLAELKASYLRRQFATEAE
ISRLMKVTNLTKRAIKKWFSDTRYNQRNSKDHHGVALNDISVSANSNDGSSSTAIVIDSS
DEASESSPTTQGPIYDPRIKFRHAFPDFTPQKFKEKTPEQLLLLEASYQTSDTPSDEELS
RLRMETKLTRREVDAWFSERRKMPVDSDGTEEPESERIKAPSSGQEAQTPPSGRKIMKKT
PEQLHVLKSTFVRTQWPSAEEYDKMAEESGLPRTYIVNWFGDTRYACKNSNLKWYYLYQS
GKVNEAMNGGELKKKPRKRFRGWSRRTRRPYPCKQTTPAIKVKTGKEILKEHYLKHKVLN
EKDLDELVAKSSMSYEQVRDWFAEISRREEKGLDPFSDGEEETHGDSEAEMEVKEQGDVV
TDEKNNDNDNKDDENNNDEVDNNDNETTEEPQCIEQSQPESEDQ
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcagaagaaaatcaacaacgccttgcatggtccctcctgttcaaatggtggat
tcagaccctgacatggaggtcgttacagagggagaggctgagggggccgctaactgtcct
gtggaaaactcaactgaaagcatcccgaatgaggaggactcacaggccatcgaccacttc
attaaaactatggactcgagtacggcagaaggaggttatgagtgcaagtactgcagcttt
cagacctcacagctcaatatgtttaccttgcacgtggacactgagcacccaaatatagtt
ctaaactcatcttatgtgtgtgttgagtgtgactttcacaccaagaggtatgatgcattg
ttggagcataatgcacgccaccaccctggagaagacaatttcaccaggactatggtgaaa
cgtaacaatcaaaccatctttgagcagagagtcaatgacttgacctttgatggcagtttt
gttaaggttgaggaggatgaggacacatcctgtaagggtattgccctaagcaaaacgcca
atcatgaagatcaagagtagggcggaggccaagaagtttacagggtcacacaaaatggca
gattacagtgtcattaaagtggagagtgatggggaggaagagacggaggaggtggtcccc
cctcctgtcacccccaatgtagtggctgtgtcgacccctctgaccattcaacctattcag
caaagcataatgatcaacagcccaaacgtgctccaaataaagactagtaactcagccaca
atgctccccccagggacattggctcaagttctgtctgccttacagaatcagcagacctcc
cagacccagctcctcatcccggtcagtagtatccccacatacaatggggccatggacaat
aatgtcctgctggtcagcgcctacaacaggttcccttacccatctgtgtcagaaatcatg
ggtctagcagcccaaaccaagttcacagaggagcaaataaaggtgtggttctctgctcag
cggctgaagcacggtgtgagctggaccccagaggaggtggaggaggccaggaggaagaag
tttaatggctcagtgcaggcggtgccacagaccatcactgtcatcccagccaattttgca
acagcagccaatggcctgcagtccatctttcagacttgtcagattgtagggcaaccaggg
atggttttgactcaggtagggggtggcaacgctgtccctgtggcctcacccatcacgtta
gctgtagctggggtccccaaccccagaaccagtgtcagtaaggtgccagaaccctccacc
tctgagactgcttctccactcagtcccgattccctgggagcgcgacctaaaaaatccaag
gagcagctagcagagctgaaggccagttacctaaggagacagtttgccactgaggcagaa
atctctcggttgatgaaggtcactaacctcaccaaaagagcaataaagaagtggttcagc
gacacacgctataaccaacgcaactcaaaggaccaccacggcgttgccttaaatgacatt
tcagtcagcgccaacagtaatgacggcagcagcagcacagccattgtgatcgactccagc
gacgaagccagtgaatcctctccgacaacccaagggcccatttatgatccacgaatcaag
ttccgccacgcctttcctgacttcacacctcagaagttcaaggaaaagactccggagcag
cttctgcttttggaggccagctaccagacgtctgacacacctagcgatgaggagctaagt
aggcttaggatggagactaaactgactaggcgagaggtggacgcctggttctccgagagg
agaaaaatgccagtggactctgatggcacagaggagccggagagtgaacggatcaaagcg
ccttcctctgggcaagaggctcagactccacccagcggccgaaagataatgaagaaaacc
ccagagcagctccacgtcctgaaaagcacctttgttcgtacccagtggccctctgctgaa
gagtacgacaagatggcagaggagagcgggttacccagaacctacattgttaactggttt
ggagacacccggtatgcctgcaagaacagcaacctgaagtggtactacttgtaccagagt
ggaaaagttaacgaggcaatgaacggaggtgaacttaagaagaagccacggaaacgcttt
cgaggttggtccaggaggacgaggcggccatacccctgcaaacaaacaacccctgccatc
aaagtcaagacgggtaaagagattttaaaggagcactacctcaagcataaggtcttaaat
gagaaagatttggatgaactggtggccaagtccagtatgagctatgagcaggtgcgggac
tggtttgcggagatcagcaggagggaagagaaaggccttgaccctttcagtgacggtgaa
gaggagacgcatggcgacagtgaggcagagatggaagtgaaagagcaaggggatgtcgtc
actgatgaaaaaaataatgacaacgataacaaagatgatgaaaataacaatgatgaagtt
gataataatgacaatgaaaccacggaagagcctcaatgtatcgagcaatcacagccggag
tcagaggatcagtga
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