Salvelinus namaycush (lake trout): 120022571
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Entry
120022571 CDS
T07522
Name
(RefSeq) tapasin-like
KO
K08058
TAP binding protein (tapasin)
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120022571
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Gene cluster
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Motif
Pfam:
V-set
Ig_3
ig
C1-set
Ig_2
KOW6_SPT5
Motif
Other DBs
NCBI-GeneID:
120022571
NCBI-ProteinID:
XP_038822456
UniProt:
A0A8U0PDH3
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Position
Sna27:30479765..30484516
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AA seq
439 aa
AA seq
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MDNISTIYKLSFLAFTCFIHVYGTSCPVLECWFVQEKPGRGGGFPAAMIQEKSLLYINTD
SETKSQQEPSADINHDRVYYITDPAAILCSSSLHPPEGSVHKPQCEINPFMPQPSTVQWA
VPLTDSAHSPIYLQADWYSAALQGLDGQLGLSSVMRAPTATKEPTVVLSVSSRTPLVRSR
LGEPVVLDCGFWMEATSPLSGSGFAVEWRYQFRGDGRLVLAYDGKTDRFAETKEKGAGLD
FTALHETGNASLILQEAEVRHTGTYICTVYLPYLLAQVAVELEIVEPPSLSIFPSPLPLS
VPGQVVKVQCEASGFFPLSLEFHWELTGPDGKVRPLGQGSVTGHRQGPDNTYSQTTRLEL
DSAKLDLGRGGEVTCVAVHPGGTRRASVTLNVIGVNGPSIEDSMAMVAVALGLYGLIKIV
SWTFNSGSDDTNSQEKKVK
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggacaatatttcaacaatttacaagctatcgtttctcgcctttacttgcttcatacac
gtctatgggacaagctgtccagttctggagtgctggtttgtccaggagaaaccaggtcga
ggtggtggattccctgctgcaatgattcaggagaagtcactactgtatatcaatacagac
tcagaaaccaagtcacagcaggaaccatctgcagacatcaaccatgatagagtctactac
atcactgacccagcagccatcctctgcagttcctctctgcacccaccagagggctcagtc
cataaaccacagtgtgagataaaccccttcatgccccagccctccaccgttcaatgggca
gtcccgctcactgactctgcccacagtcctatctacctgcaagctgactggtactctgca
gccttgcagggccttgacggacagctgggcctgtccagtgtcatgcgtgctcccacggca
accaaggaacccactgtggtgctcagtgtgtccagtcgaacccccttggtccgttccaga
ctcggggaaccggtggttctagactgtgggttctggatggaggccacttctcctctctct
ggctctggcttcgccgtggagtggcgctaccagttcaggggcgatggacgtctggtcctg
gcctacgacggaaagactgaccgatttgccgagaccaaggaaaagggagcggggctagac
ttcacggctctgcacgagacaggaaatgcatcactgatcctgcaggaagctgaagtgcgc
cacacaggaacctacatctgcacggtgtacttgccatatctcctggctcaggtggcagtg
gagctggagattgtagagcctccgtccctctccatcttcccctccccgctccctctctcc
gtgcccggccaggtggtgaaggtgcaatgcgaggcgtcaggattcttccccctctccctg
gagttccactgggagttaacagggcctgacggtaaggtcaggcccctgggtcaaggcagc
gtgacaggccacaggcagggcccagacaacacctacagccagaccacccgtctggagtta
gactcagccaagctggaccttggccgtggaggggaggtcacctgtgtggccgtccatcct
ggaggcacccggcgggccagcgtcaccctcaatgtcatcggtgttaatggtccctccatt
gaagactccatggcgatggttgccgtggccctggggctctatggtttgatcaagatcgtc
tcctggacatttaactctgggtccgatgatactaactcacaagagaagaaagtgaagtaa
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