Salvelinus namaycush (lake trout): 120022580
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Entry
120022580 CDS
T07522
Name
(RefSeq) zinc finger and BTB domain-containing protein 22-like isoform X1
KO
K10502
zinc finger and BTB domain-containing protein 22
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120022580
04121 Ubiquitin system [BR:
snh04121
]
120022580
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
120022580
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
120022580
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
zf-H2C2_2
zf-C2H2
zf-C2H2_jaz
zf-C2H2_4
DUF5810
zf-Di19
C2CH-4th_BIRD-IDD
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
120022580
NCBI-ProteinID:
XP_038822466
UniProt:
A0A8U0TNV5
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Position
Sna27:35679603..35697673
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AA seq
714 aa
AA seq
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MDQDCIVSGAPAGPVVQVCFPSVRAAVLDSLNRQREEGRLCDLSIQVQGQVFRAHRCVLA
ASSPYFHDQVLLKNVTTVSLPSVMDPVAFESVLSSAYTGRLSIVRDDIVNYVTVASFLQM
WHIVDKCTEILKRPRPPTECNPVDVPAATRHGASSRQQSPSSTDCLYMEREGKEKEKRTY
GQVQNALPPLATWRRPHQFPRWGHPRSSPQPALSMPVQHLADSQLDSHPAGESDYSSCEE
LWMSSHSKASLLSHHDGRGLDHSHTRHGGFPGEALRLRARLRQRAAPPSAEKLHGRDRGS
GEGYGEDPQEKKGTERVIEASEGMGEELEEEKREGPELRGHSVDFHSSVHQGEEGGQPEG
RKSSGELQKKEERQLGRSSALTSPRAGEPDEVIPGTSCSASTPSTQKQWQASPWSQQVAR
PQAGEEDYRREDDEDDDVGEGDFGRFADGAFGRETYDEIEDGTGQVSQRPLVPTSPDDKD
FILGAPELNWPNGANMTHGGGTPTSTSSCHLSPSPAPFPPSSSPPIPSSSSSISLAGAPY
TGKVHFCHCGKAYTLKSMRDRHVKMQHLNLRPFACPVCAKSFKMKHHLTKHLKTHGGLRP
YECGLCGKKVIWRDSFLRHQARCERLAASYDGAAASSNTTAAAEMDDGYAYGFKEGEVFF
SQGGQVKVEQADCQGEAESGMSALLAGGVGAELGSQSRTVVSHSFKEEASNRFS
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggatcaggactgcattgtctctggtgcccctgctggcccggtggtccaagtatgcttc
cccagtgtgcgtgcagcagttttggacagcctgaatcgacagcgggaggagggccggctc
tgtgacctctccatccaggtgcagggacaggtgttcagggcccaccgctgtgtgctggct
gcctcctcgccatactttcacgatcaggtattgctgaagaatgtgacgacagtgtctctg
ccctctgtcatggaccctgtggcctttgagagtgtcctgagttcagcctacaccggccga
ctgagcatagtgcgtgatgacattgtcaactatgtaacggtagccagctttctccagatg
tggcatattgttgacaaatgcacagagatcctgaagagacctcgacccccaacagaatgc
aaccctgtggatgttccagctgccacacgccacggtgcctcctcaaggcagcagtcccca
agcagcaccgactgcctatacatggagagagaggggaaagagaaggagaagaggacctac
ggccaggtgcagaatgctctgccgccattggccacgtggaggaggccccatcagttcccc
aggtggggccaccccaggtcctcaccccagccagccttgtccatgcctgtccagcaccta
gctgactcacagctggactcccaccctgctggggagagtgactactccagctgtgaggag
ttgtggatgtccagccacagcaaagccagcctcctaagccatcatgatgggagaggactg
gaccatagccacaccaggcacggggggtttcctggtgaggcattgagactgagagctaga
ctgagacagagggcagcaccaccaagtgctgagaaactgcatggcagggatagaggaagt
ggagagggctatggggaagatcctcaggagaagaaggggactgaaagagtgattgaagca
agtgaaggaatgggagaagagttggaagaggagaagagggagggtcctgagctaagagga
cactctgtagacttccactctagtgtacaccaaggtgaggagggaggacagccagagggg
agaaagagctcaggggagctgcagaagaaagaggagagacagttggggagaagttcagcc
ctgacttctccccgtgctggggaaccagatgaggtgattcctggaacctcctgctcagct
tctacaccctctacccaaaagcagtggcaggcgagtccctggtctcagcaagtagctagg
ccgcaagctggagaggaagactacagaagagaagacgacgaagacgatgacgtgggggaa
ggggactttggccgatttgcggatggtgcctttggaagggaaacctatgatgagattgag
gatggcaccggacaagtttctcagagacccttagtacctacctctcctgatgacaaggac
tttatcctgggggccccagagttgaactggcccaatggggcaaacatgacccatggtggt
ggtaccccaacatccacctccagctgccacctgtccccatctcctgctccattcccccct
tcctcctcaccccccatcccatcttcctcctcttccatctcccttgccggggccccttac
acaggaaaagtgcacttctgccactgtgggaaggcctacaccctgaagagtatgcgtgac
cgccacgtcaagatgcagcatctcaacctgcggcccttcgcctgccccgtgtgcgccaag
agcttcaagatgaagcaccacctgaccaagcacctgaagacccacggcgggctgcggccc
tacgagtgtggcctgtgtgggaagaaggtcatctggagggatagtttcctgcgccaccag
gcacgctgtgagagactggccgccagctatgatggagccgctgccagtagtaacaccaca
gcggctgctgaaatggacgatggttatgcctatgggttcaaggagggggaggtatttttt
tcacagggcggtcaggtgaaagtggagcaggcagactgtcagggggaggcggagtctggg
atgagtgcgttgttagcgggtggggttggggctgaattaggctctcagtcaagaactgtg
gttagtcacagctttaaggaggaagccagcaacaggtttagctga
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