Salvelinus namaycush (lake trout): 120022629
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Entry
120022629 CDS
T07522
Symbol
ago3b
Name
(RefSeq) protein argonaute-3
KO
K11593
eukaryotic translation initiation factor 2C
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120022629 (ago3b)
03036 Chromosome and associated proteins [BR:
snh03036
]
120022629 (ago3b)
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
120022629 (ago3b)
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
120022629 (ago3b)
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
120022629 (ago3b)
microRNA pathway
RISC loading complex
120022629 (ago3b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoMid
ArgoN
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
120022629
NCBI-ProteinID:
XP_038822535
UniProt:
A0A8U0PD18
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Position
Sna27:35508549..35549916
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AA seq
878 aa
AA seq
DB search
MEIGTSGDVGAQALFTVPRRPGFGTMGKPIKLLANCFQVDIPKMDVYLYEVDIIPEKCPR
RVNREVVDSMVKHFKVTIFGDRRPVYDGKRSLYTANPLPVATAGVDLDVTLPGEGGKDRP
FKVSIRFVSLVSWHMLHEVLTGRTVPEPLELDKPISTNPVHAVDVVLRHLPSMKYTPVGR
SFFSSPEGYDHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCEVLD
IHNIDEQPRPLTDSHRVKFTKEIKGLKVEVTHCGTMRRKYRVCNVTRRPASHQTFPLQLE
NGQTVERTVAQYFREKYSLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDN
QTSTMIKATARSAPDRQEEISRLVRSANYEMDPFVQEFQFRVRDEMEQVTGRVLPAPGLQ
YGGRVSSEHFLPQQVNPVVSLQNRTVATPSHGVWDMRGKQFHTGVEIKMWAIACFATQRQ
CREEILKGFTDQLRKISKDAGMPIQGQPCFCKYAQGSDSVEPMFRHLKNTYTGLQLIIVI
LPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINVKLGGINNILVPH
QRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDAHPSRYCATVRVQRPRQEVIQD
LASMVRELLIQFYKSTRYKPTRIIFYRDGVSEGQFRQVLYYELLAIREACIMLEKEYQPG
ITYIVVQKRHHTRLFCADRNERVGRSGNIPAGTTVDTDITHPYEFDFYLCSHAGIQGTSR
PSHYHVLWDDNCFTADEFQLLTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLVDKE
HDSAEGSHVSGQSNGRDPTALAKAVQIHHDTLRTMYFA
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcggaacttcaggagatgtgggggcccaggccctgttcacagtgccgcggcgg
cctggctttggcaccatggggaagcctatcaagctgctggccaactgcttccaggtggat
atccccaagatggacgtctacctctatgaagtagacatcattcccgagaagtgcccgcgt
cgcgtcaacagggaggtggtggactccatggtgaagcacttcaaggtgaccatctttggg
gaccgaaggccagtctacgatgggaagaggagcctctacacagccaaccccctaccagtc
gccacagcaggggtggatctggacgtcaccctgccaggggaggggggtaaggatcgcccc
ttcaaagtgtccatcaggtttgtgtcgctagtcagctggcacatgctgcatgaggtcctg
acagggcgcaccgtgcctgagcccttggagctggacaagcccatcagcaccaaccctgta
cacgctgtggacgtggtgctgcgacacctgccctccatgaagtacaccccagtggggcgc
tcattcttctcctcccctgagggttacgaccatcccctgggcgggggcagggaggtgtgg
ttcggcttccaccagtcggtgcggcccgccatgtggaagatgatgctcaacattgacgta
tcggccacggcgttctacaaggcccagccggtgatccagttcatgtgtgaggtcctggac
atccataacatagacgagcagccccggcccctcaccgactcccacagggtaaagttcacc
aaagagatcaaaggtctgaaggtggaagtgacccactgcgggacgatgcgtaggaagtac
agagtgtgtaacgtgacccgccgccctgccagccaccagacgttccccctgcagctggag
aatggtcagacagtggagcgcacggtggcccagtacttcagagagaagtacagcttgcag
ctgaagtacccccacctcccctgcctccaggtgggccaggagcagaaacacacctacctg
cccctggaggtgtgcaacatagtagctggccagcgctgtattaaaaaactcactgataac
caaacgtccaccatgatcaaagccacggcccgctctgccccagacagacaggaggagatc
agcaggctggtgcggagtgcgaactatgagatggacccgttcgtccaggagttccagttc
cgcgtgcgtgacgagatggagcaggtgacgggccgcgtgctgccagcccccgggctgcag
tacggcggcagggtgagctcggaacacttcctgccccagcaggtgaaccctgtggtgtct
ttgcagaaccgcacggtggccacgcccagccacggcgtgtgggacatgaggggcaaacag
ttccacaccggggtagagatcaagatgtgggccatcgcctgcttcgccacacagaggcag
tgtcgcgaggagatcctcaagggtttcactgaccagctgcgtaagatctctaaggatgct
gggatgcccatccagggccagccatgtttctgtaaatacgcccagggatcagacagcgtg
gagcccatgttcaggcacctgaagaacacctacactggcctgcagctcatcatcgtcatc
ctacctgggaagacccctgtctatgctgaggtgaagcgggttggagacaccctcctcggc
atggccactcagtgtgtccaggtgaagaacgtggtgaagacgtccccccagaccctctcc
aacctctgcctcaagatcaacgtcaagctggggggcatcaacaacatcctggtcccacac
caacgtccctccgtgttccagcagcctgttatcttcctgggggccgacgtcactcaccct
ccagccggagacggaaagaagccatccatcgcagcggtggtgggcagtatggacgcccac
cccagcaggtactgtgccacagtgagggtccagagacccagacaggaggtgatccaggac
ctggcctccatggtgcgggagctcctcatccagttctacaagtccacccgctacaaacca
accagaatcatattttacagggatggcgtgtcagagggtcagttcagacaggtgctgtac
tacgagctgctggccatcagggaagcctgtatcatgttggagaaggagtaccagccgggc
atcacctacatcgtggtgcagaaacgccaccacacacgcctcttctgtgcggaccgcaat
gagcgggttggacgaagtggtaacattcctgcaggcaccactgtggacaccgatatcact
cacccctatgagtttgacttttacctctgcagccacgcaggaatacagggtacaagcaga
ccttcccactaccacgtcctgtgggacgacaactgcttcacggctgacgagttccagctg
ctcacctaccagctgtgccacacctacgtccgctgcacacgctcagtctccatccctgcg
ccagcctactacgcccacctggtggccttccgcgcccgctaccacctggtggacaaagaa
catgacagtgcggagggcagccacgtctcggggcagagtaacggccgagaccccacggcc
ctcgccaaggctgttcagattcatcacgacacactgaggactatgtatttcgcctga
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