Salvelinus namaycush (lake trout): 120022647
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Entry
120022647 CDS
T07522
Name
(RefSeq) transcription factor Sp4-like isoform X1
KO
K09194
transcription factor Sp4
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120022647
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Cys2His2 SP/KLF family and related proteins
120022647
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Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_6
Zap1_zf1
DUF7376
Motif
Other DBs
NCBI-GeneID:
120022647
NCBI-ProteinID:
XP_038822555
UniProt:
A0A8U0PCS8
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Position
Sna27:15087856..15124347
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AA seq
789 aa
AA seq
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MSDQKKEVSGSEGGKPGKKGKRSGSQDSQPSPLALLAATCSKIGGQGGVEGQVQLQAGQI
QLQGGQIQGHIVVDAAGNQTLVQQQLELVPAQFTGNGWQIITTAPQMANDTANQPVAVTL
ATTSANDSAPAGRKVKAVCGTKTIAANQQPQQQQQFQIIQVQNMPSSGGGVQYQVIPHLQ
TADGQQIHISPQTASLGGQHIQISPAQGGLPEQVQLIQTQNQSQTQAILQPANQQAILTG
SANQTLQLRPAQSFPLQMQTLQGSQTQVMTTVPINIGGMTLALPVMNNLAGGGAVQLIQA
ADGSFTVANSNQLVTTTAAAVSGAATGSSGGTITTVAGCDGALSDGTQLSSVAGSDGGAE
RDSQNQPSEQDSQNSQMSQANGLQGQSDPPGTIQQVIVGQMGNQVLQQIQIQPQNQIQGQ
PHQIQTFQLGPGGTLQPIQAFQNQQILIRTPTLSSSGQITWQTLQLPGGMSVPQQLTLAP
VGGGAVGGGGFVQLGGAPLTLSAAQINPGSGVQTVNIAGLGTAGVQMQGVPLTITGLQGQ
PQGQEGGVKVQSSPVKVTMGNVAGSSLSPDQVGSVQSASDQEGPPSKRLRRVACSCPNCR
DGEGRYYTHTHTHTHTDSHCLSLTVCVCCRTSGDPSKKKQHVCHMEGCGKVYGKTSHLRA
HLRWHTGERPFVCNWIFCGKRFTRSDELQRHRRTHTGEKRFECPECSKRFMRSDHLSKHI
KTHQNKKGGASLAIITTEDMEDSNQGLGSSPRIVTVETLSQDSAPATPTASSPNQMEGEE
EEEEEEEFE
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatcagaagaaggaagtgtcgggatcagaaggagggaaaccaggcaagaaaggc
aaacgttctggatcacaggattcccagccgtctcccctagccctactggctgcgacctgc
agtaagataggaggtcagggaggagtggaaggacaggtccagttgcaagctggtcaaata
cagttgcagggtgggcagatccagggtcatatagttgtagacgcagcaggtaatcagact
ctggttcagcagcagttagaactggttcctgcccagttcactggtaatggctggcagatc
atcactaccgctccccaaatggccaatgacactgccaatcaacctgtcgcagtaacgctg
gccaccacttcagccaatgacagtgctccggcaggccgtaaggtgaaggcagtgtgcggg
actaaaaccatagcagccaatcagcagcctcagcagcagcagcagttccagatcatccag
gtgcaaaatatgccttcgtcggggggtggggtccaataccaggtgatcccccacctgcag
acggcagacggccaacagatccacatcagcccccagaccgcatccctgggggggcagcac
atccagatcagtccggcccagggcggtctaccagagcaggtccagctgatccagacccag
aaccaatcccagacccaggccatcctacaaccggccaaccagcaggccatcctcactggc
tcagccaatcagacgttgcagcttcgtccagcccagtccttcccgctacagatgcagacc
ttacagggctcccagacccaggtaatgactacagtacccataaacatcggcggtatgacc
ctcgccctgccggtcatgaataatttagcggggggcggagccgtgcagcttatccaagca
gcagacggcagctttaccgtagctaacagtaaccagctggtgacaacaacggcggcggcg
gtgtccggggcagctaccgggtcatctggcggtaccataacaactgttgccgggtgcgat
ggagcattgtcggacggaacacagctgagttctgtagccgggtcggacggaggggcggag
agagactcacagaaccaacccagcgagcaggactcacagaactcacagatgagccaggcc
aacggactacagggccaatcagatcctccagggaccatccagcaggtcatcgtgggacag
atgggcaaccaagtgttgcagcagatccagatccagccacagaaccagatccaaggccag
ccgcatcagatccaaacctttcagttaggaccaggcgggaccctacagcccatacaagcc
ttccagaaccaacagattctgatccggaccccaaccctctcctcgtcgggccagatcaca
tggcagactctgcagctccctggggggatgtctgtgccccagcagctgaccctggcccct
gtgggcggaggggctgtgggaggagggggcttcgtgcagctggggggggctcccctgacg
ctgagtgcagcccagatcaaccctgggtcgggggtgcagacggtcaacatcgctggactg
ggcactgctggagtacagatgcagggggtacccctcaccatcactggactacagggtcag
ccgcagggtcaggagggcggggttaaggtccagtcgtccccagtaaaggtaaccatgggt
aacgtggcggggtcgtcgctaagcccagaccaggtgggttctgtccagagtgcatcggac
caggaaggaccacccagcaagaggctccgcagggtggcgtgctcctgtcctaactgtagg
gacggagaggggaggtactacacacacacacacacacacacacacacagactctcactgt
ctctctctgactgtgtgtgtgtgttgcaggaccagtggagacccgtctaagaagaagcag
catgtgtgtcacatggagggctgtggaaaggtctacggtaagaccagtcacctgagagct
cacctccgctggcacacaggagaacgacccttcgtctgcaactggatcttctgtggcaag
aggttcacacgctcggatgaactgcagagacacagacggacacacacaggtgagaagagg
tttgagtgtccagagtgcagtaagcgtttcatgcgtagcgaccatctctccaaacacatc
aaaacccaccagaacaagaagggcggggcttctctcgccattatcaccactgaagacatg
gaagactccaaccagggtttaggctcctcccctcgcatcgtaactgtggagacactctcc
caggactccgcccctgccactccaacagcctcctcgcccaatcaaatggagggagaagag
gaagaggaggaagaggaggagtttgagtag
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