Salvelinus namaycush (lake trout): 120022661
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Entry
120022661 CDS
T07522
Name
(RefSeq) vacuolar protein sorting-associated protein 45-like
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120022661
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120022661
Membrane trafficking [BR:
snh04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
120022661
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
B12-binding
Motif
Other DBs
NCBI-GeneID:
120022661
NCBI-ProteinID:
XP_038822573
UniProt:
A0A8U0TNX2
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Position
Sna27:complement(28549933..28575838)
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AA seq
569 aa
AA seq
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MNVTLAVKQYISKMIENSGPGMKVLLMDKETTSIVSVVYTQSEILQKEVYLFERIDSQNR
DNMKHLKAICFLRPTKENVENLIQELRRPKYSVYFIYFSNVISKSEIKALAEADEQEVVA
EVQEFYGDFIAVNPHLFSLNLSGVARGRSWEPTLLPRTTQGLTSVLLALKKCPMIRYQLS
SDMAKRLGESVKQIITKEYELFDFRKTEVPPLLLIMDRSDDAITPLLNQWTYQAMVHELL
GLNNNRIDLSRVPGISKELKEVVLSAENDEFYANNLYLNFGEIGTNIKNLMEDFQKKKPK
EQQKLESISDMKAFVDNYPQFKKMSGTVSKHVTVVGELSRLVSERHLMEVSEVEQELACQ
NDHSSASQNVRRLLQNPRVSELDAVRLVMLYALRYERHSSSILPGLMEELNRKGVSERHR
RMVTSMVEYGGKRVRGSDLINPQDAVAITKQFFKGLKGVENVYTQHAPLLQETLDQLIKG
RLKDSQFPYLGPSSLRDRPQDIIVFVIGGATYEEALAVYNLNRTMPGVRIVLGGTTIHNT
KSFLEEVTLTAGAGQAERVQRAGGHPNRR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgacacttgctgtcaagcagtatatctccaaaatgatagaaaacagcgggcca
ggaatgaaggttctgctcatggataaagagacgaccagcatcgtcagtgtggtctacact
caatccgagatcctacagaaggaggtctacttgtttgaaagaatcgactcacagaatcga
gacaacatgaagcacctcaaagccatctgcttcctcaggccaaccaaggagaatgtggaa
aatctgatacaggagctccggcgaccaaagtacagtgtctacttcatctacttcagcaac
gtcatcagtaagagtgagataaaagccctggctgaggcagatgaacaggaggtggttgca
gaagtgcaggagttctatggagacttcattgctgtgaacccacaccttttctccctcaac
ctcagtggtgtggcaaggggtcgtagctgggagcccacgctcctaccacgtaccacccag
ggtctgacctcggtgctgttggccctcaagaaatgtcccatgatccgctaccagctgtcc
tcagacatggccaagagactgggagaaagcgtgaagcaaatcatcaccaaggagtatgag
ctgtttgacttcaggaagacagaggtgcctcctctcctgctcatcatggaccgcagcgat
gacgccatcaccccactactcaaccagtggacgtaccaggccatggtgcacgagctgctt
ggcctcaacaacaaccgtattgacctgtcccgagtcccagggatcagcaaggagctgaag
gaggtggtgctgtctgcagagaacgatgagttctatgccaacaatctgtacctgaacttt
ggagaaatcggtacaaacatcaagaacctgatggaggactttcagaagaagaagcccaag
gagcaacagaagctggagtccatctctgatatgaaggcgtttgtggacaactacccccag
ttcaaaaagatgtctggcacagtgtcgaagcacgtgactgtggtgggcgagctgtctcgc
ctggtgagcgagaggcacctgatggaggtgtcagaggtggagcaggagcttgcctgccag
aatgaccactcaagcgcgtcacagaatgtgcgtcggctgctgcagaacccgcgggtgagc
gagctggacgcggtgcgcctggtgatgctgtacgcactgcgctacgagagacacagcagc
agcatcctgccgggcctcatggaggagctcaacaggaagggcgtgtcagagaggcatcgc
aggatggtaacgtccatggtggagtatggagggaagagggtgagaggaagtgacctcatc
aacccccaagacgcagtcgccatcaccaaacagttcttcaaggggctgaagggagttgag
aatgtgtacacgcagcatgcaccgttactgcaggagacattggaccagctgatcaagggg
cggctgaaggacagtcagttcccctacctaggacccagctcccttcgagacaggccacag
gatatcatagtgttcgtcatcggaggggccacctatgaggaggcgctggcagtctacaac
ctgaaccgcaccatgccaggtgttcggatcgtactgggcggcaccaccatccacaacacc
aagagcttcctggaggaagtgacattgacggcgggtgcgggccaggccgagagggtgcag
agggcgggtggtcatcccaacagacgctga
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