Salvelinus namaycush (lake trout): 120022836
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Entry
120022836 CDS
T07522
Symbol
cgnb
Name
(RefSeq) cingulin
KO
K06102
cingulin
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
120022836 (cgnb)
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Paralog
GFIT
Motif
Pfam:
Myosin_tail_1
CCDC39
LEKR1
CCDC171
NOCA1_mid
Rab11-FIP3
FKBP-like_N
Motif
Other DBs
NCBI-GeneID:
120022836
NCBI-ProteinID:
XP_038822785
UniProt:
A0A8U0TNQ6
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Position
27:39444086..39502670
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AA seq
1197 aa
AA seq
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MALSTDRKPPLDYGVQIRFIKDLHDTGGGYPEKTRGGSGAMPPSKYGVAVRVQGISGQPY
VVLKDGEKGDSYGVQLKTQQAQSQNPNSGLSSPYNSLPQRKEGGNVQNPYAPAGLSFPVS
PKSTPEGEAREDFGSPFKRPPGDGQAGSQREGEGGPRREGQMKVKVKEEPSPTAAEPYRL
DMKERGWVNGEELNEAGLKPVCPRGARQNGVGLGGLLGRNGLDLSIPEPLPPVSFNEAIV
PAIDKTSLAPINKLISKFNIGTPTGETRGRSGTRLRLKYDERRRSRSLDACKDVHPEVSP
PSPTPNTTSLLFSSTSSSTSSTPSYSSLRMSTASVAKVTALPGPKLSFIKSPGKLVKETP
PAIPPKKTGMPDPLRNQIGEVISGEEPPTKQAVYTILKEGTSESDVSIKRKGNLVYETTS
GAKVPPKQGSHGNLKKELEQRLNENHQLQEQLDRNKTELQMAQEELTQLRMAREGAEFRV
RQQEDQLAELQEELRGIPENTPQTDSMSLQTDVMSLQADLAEAAMLRQRQEEVLRQRERE
LTALKGALKEEVGSHDQEMEALREQYSQDMETLRSTMEQVSQSQQQIEEERQRVNDAMLC
LEEELESCRDQGGQWRKQLETTTEELHSTKQELMRARLEKEEFEGELKELQDSLMSMKKQ
MPGFDEADSYAEDLQRCNDDIKQARTEVDRQKVELNEKEEELQALRRASQVRESELRSEN
DRLKDQSRQGKDELEMALEKAKQSSGGSSPLDQGSLELQEANTRLRERLTRMTRLHSSVP
QSSEAEQALEDENRSLRSQLEEARRGFSRLGKDREVLGQRLEERDLERDALRKGKSDLEE
QKRLLDRALEKISKEMEVMLGDSRQSVQALQSQMDEYRERSRRDLQDAQRQGKDRLAELQ
RAQANLKTLQEEVSRLKKELLVCGEERDSAQLERDLLSSRLKHLESELDSGRSSQTDRNR
ELRGLEDKVKTMEIELDEEKSSVELLNDRVARSREQIDQLRGELMKERSTVHDLEMDKSV
LERQVKELRSRVADMETQSRPSAGITLLEGKVQELEERLHSEEREKLSIQASQRRVERKL
KEIIVTLDQERNQHAEQRDQLSLRVKALKRQLDESEGEVERLEGVRRKALRDLEEQQELQ
EALQAKVTALESEKRKVYQTRRPVLGASNLSSEDEDGFYDNSITSILTEGQLHTTNC
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atggcgctctccacagacaggaagcctccgcttgactacggcgtccagatccgcttcatc
aaggacctccatgacactggcgggggctaccccgagaagaccagagggggcagcggcgcc
atgcccccctccaagtacggggtggccgtgcgggtacagggcatctccggccagccctac
gtggtgctgaaggatggggagaagggagactcgtatggggtgcagctgaaaacccagcag
gcccagtcacagaaccccaactcaggcctctcctcgccctacaacagtctgccccagagg
aaggaaggggggaacgtccagaacccttacgcccctgcaggactcagctttccggtctct
ccaaagtccacaccagagggcgaggccagggaggactttgggagtcctttcaagagacct
cctggggatggccaggctgggagccagagagagggtgagggtgggccccggagggaagga
cagatgaaggtaaaggtcaaggaagaacccagtcccacagcagcagaaccctacagattg
gatatgaaggagagaggttgggtcaatggggaggaattgaatgaggcagggctcaaacct
gtttgtcccagaggggccaggcagaatggggtggggctcggtggtttgctgggcagaaat
ggacttgatttgtccatcccagaaccccttcctccagtgtcgttcaatgaggcgattgtt
cctgccatcgacaagacctccctggcgcctatcaacaagctgatcagcaagttcaacatt
ggcactcctactggagagaccagggggcgctccggaacaaggctgcggctcaagtacgac
gaacgcagacgctccagaagtctggatgcttgcaaagacgttcatcccgaggtctcccct
ccttcgccaactcccaacactacctccttgctcttctcctccacctcctcatccacgtca
tccacaccttcatacagtagcctaaggatgagcactgcctcagttgccaaggtgacagcc
ctccctggccccaagctgagcttcataaagtcacctgggaagttagtcaaggaaacccct
cctgccatcccaccaaagaagacagggatgccggaccctctgaggaatcagattggagag
gtcatcagtggagaggaaccaccaaccaaacaagctgtctacaccatcctgaaagagggg
accagtgagagtgatgtatccatcaaacgtaaaggcaaccttgtctacgagacgaccagt
ggtgctaaggttcctcctaaacaagggtctcatgggaatctgaagaaggagttggagcag
cgtctgaatgagaaccaccagcttcaggaacaactggaccgcaacaaaaccgaactacag
atggcccaagaagagttgacccagctgcggatggccagagagggggcagagtttcgggtg
cgtcaacaggaagaccagctggctgagcttcaggaggagctgaggggaattccagagaac
acaccacaaacagactccatgtcactgcagacggatgtgatgtcgttgcaggcggacctg
gcggaggcggcaatgttgcgccagcgtcaggaggaggtgctgcgtcagagggagagagag
ctgacggccctgaagggggcgctgaaggaagaggtggggagccacgaccaggagatggag
gccctcagggagcagtacagccaggacatggaaaccctgaggagcaccatggaacaggtg
tcacagtcccagcagcagattgaggaggagaggcagagggtgaatgatgccatgctctgc
ctggaggaggagctagagagctgcagggaccagggaggccagtggaggaagcagctggaa
actaccacagaggagcttcacagcaccaagcaggagctcatgagagcgcgtttggagaag
gaagagtttgagggggagctgaaggagcttcaggattcactgatgtccatgaagaagcag
atgcctggctttgacgaggcagactcttatgcagaggatcttcagcgttgtaatgatgat
atcaagcaggctcgcacggaggtcgacagacaaaaggttgagctaaatgagaaggaggag
gagcttcaagccctgaggagggctagccaagtacgggagtctgaattgaggtcagagaat
gacaggctgaaggaccaatcacggcaggggaaagatgagctcgagatggcacttgagaag
gcaaagcagtcgtcaggtgggtcctcaccattggatcaggggagtctggagcttcaggaa
gccaacacaaggctgagagaaagactgactcgcatgacgaggcttcactccagcgtgccc
cagagctcagaggctgagcaggcactggaagatgagaaccgctccctgaggtcccaactg
gaggaagccaggcgaggattctcccgtctgggcaaggacagggaggtgctgggccaacgg
ctggaggagagagatctggagagagacgcgctgcgcaagggcaagagtgacctggaggag
cagaagagactgttagaccgggccctggagaagattagcaaggagatggaggtgatgctg
ggggactcccgtcagtcggtgcaggccctgcagagccagatggatgaatacagagagcgc
tccaggagagacctacaggatgcccagcggcagggcaaagaccgactggctgaactgcag
agggcccaggccaacttgaagacactgcaggaagaggtttctcgtttgaagaaagagctg
ctggtgtgtggggaggagagggacagcgcccagctggagagagacctgctcagcagccgc
ctcaaacatctggaaagcgaactggactctgggaggagctctcagacggaccgcaacagg
gaactcagaggcctggaggacaaagtgaagacgatggaaattgaattggatgaggagaag
agcagcgtggagcttctcaatgatcgtgttgcacgcagtcgagaacagattgaccagctg
cgtggagaactgatgaaggagcgctcaaccgtacacgaccttgagatggacaagagtgtc
ctagagagacaggtgaaggagttgaggtcccgtgtggcagacatggagacacagtcccgt
ccctccgctggaatcactttgttagagggtaaagtgcaggagctggaggagaggctacac
agtgaagagagagagaagctgagtatccaggcctcccagaggagagtagagagaaagctg
aaggaaataatcgtcactctggaccaggagaggaaccagcacgctgagcaacgagaccag
ctgtccctgcgtgtgaaggccctgaagcgtcagctggacgagagcgaaggcgaggtggaa
cgactagagggggtccgcaggaaggctcttagggacctggaggagcagcaggagctgcag
gaagcactgcaggccaaagtcacagcactggagtctgagaagcggaaggtgtatcagacg
cgtcgacctgtcctgggagcctccaacctcagttctgaggacgaggacggtttttacgac
aacagcatcacatccatcctcactgagggacaattacataccaccaactgctag
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integrated database retrieval system