Salvelinus namaycush (lake trout): 120022958
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Entry
120022958 CDS
T07522
Name
(RefSeq) huntingtin-interacting protein 1-related protein-like isoform X1
KO
K20040
huntingtin-interacting protein 1-related protein
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120022958
Membrane trafficking [BR:
snh04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
120022958
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ANTH
I_LWEQ
HIP1_clath_bdg
Motif
Other DBs
NCBI-GeneID:
120022958
NCBI-ProteinID:
XP_038822874
UniProt:
A0A8U0PFI2
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Position
Sna1:27414686..27447401
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AA seq
1066 aa
AA seq
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MNSIRRVPSRVKTKMTETNLGAEREHFDKQQLSSISKAINSNEAPVKEKHARRIILGTYR
EKGAFTFWSYVLGIPLSSNSILSWKFCHVLHKVLRDGHHNSLQDCMRHHGNIVEMGQLWG
NLHDRYGQLVALYCKLLCTKMEFHMKHSEIRSNLEVTDEVLERVAGTDVNNVFQLTVKVF
DYLDAELRLAETVIRQLNTSIAISTTTSGQCRLSPLVQVIQDCSHLYHFTVKLLFKLHAC
LPADTLQGHRDRFHDQFHSLKTFFNKARDMLYFKRLIQIPKLPESPPNFLHAASLAKHAR
PVVVIASEDEPEQQEDDDDDDPEPLINVSDVTMPSMMVPQQFDKFDQTFGPANDRDIQIE
NLQQDLVLLRADLERVKGEAQRYITQLKSQINSLETELEEQRVQKQRALVENEQLRMELE
ATRRRNAEHEIVQATFGEAETRAQATEQRYTKLKEKHTELVSSHAELLRKSADTVKILSA
TQQTQEEVERTKQQLAFEVDRIKLDADMKLEEQKFEMKKLKRDFDEKRAEVEHVKGTLQR
TEKVGEQLTSSMLALQAEKERLMRSASEKEAELSSLSQAAQLQQSSLQQERERSTRELGE
LQGKLQEKSRREVQLQQKLLEEQFSLLQGTVSEAECIIQDAVAKLDDPLHIRCTSSPDYL
VSRAEATLGSIDKVKKGHSDYLTNMGDAGGLLRALTNFSHLAADTIINGSATAHLAPTDH
SDRLTENCRGCATQSLQFLKDLKSKASLQRADPASIRIVVEKILRLGEELRPKGMDVRQD
ELGDLVDKEMAATSAAIEKAVRRIDEMMNQARMDTSGVKLEVNERILYSCTDLMKAIHLL
VLTSTDLQKEIVEGGRGAATIKEFYARNSRWTEGLISASKAVGWGATQMVESADKVVLHT
GKYEELIVCSHEIAASTAQLVASSKVKADRNSTKLTALQQASRHVNEMAANVVASTKTGQ
EHLEDKDTMDFSGMSLIKLKMEEIESQVKVLELENQLGNERLRLGELRKKHYDIAGVPAA
DLSEGNGLDPSPAPVAPSSPKPSKPSVMRKPDLAQKPNLPPKNMFR
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgaattccatacgacgggtgccttcaagggtgaaaaccaaaatgaccgaaaccaattta
ggtgcggagagggaacattttgacaagcagcagctcagcagcatcagcaaagccatcaac
tccaacgaggcgcctgtgaaagagaaacatgcacgccggataattctggggacctacagg
gagaagggggcctttaccttctggtcctatgtcttgggcatccccttgtccagcaactcc
atcctcagctggaagttctgtcacgtgcttcacaaagtgctgcgggatggccaccataat
agccttcaggactgcatgagacatcacggtaacatagttgagatggggcaactatggggc
aaccttcatgacagatatggacagctggtggctctgtactgtaagctcctttgcacaaag
atggagtttcacatgaagcattctgaaatccgatccaacctagaggtgacagatgaggtt
ctagagcgtgttgcaggaacagacgtcaataatgtgttccagctcactgtgaaagtgttt
gattacctggatgcagagttgaggctagccgagacagtgatccggcagctcaacacgtcc
attgctatctctacgacgacgtcaggccagtgtcgcctgtcccccctcgtccaggtcatc
caggactgcagtcacctctaccacttcaccgtcaagctgcttttcaaactgcatgcctgt
ctcccagcagacaccttgcaaggacaccgtgatcgttttcatgaccagttccacagcctc
aagaccttcttcaacaaagccagagacatgctgtacttcaagagactcatccagatcccc
aagctgccagaatctcctcctaacttcctgcatgcggcctccctggccaagcatgcgagg
ccagtggtggtcatcgcaagtgaggatgagcccgagcagcaggaggatgatgacgatgat
gacccagaaccgcttatcaatgtcagcgacgtcaccatgcccagcatgatggtgccacag
cagttcgacaaatttgatcagactttcggacctgccaatgacagggatatccagattgag
aacctccagcaggatttggtgctattgagggcagatctagaaagggtcaaaggagaggcc
cagcgctacatcacacagctcaagtcccagattaacagccttgagacagagctggaagag
cagcgggtgcagaaacagcgtgccctggtggagaatgaacagctgcgcatggagctggag
gccacgcggcgccgcaacgctgaacacgagatcgtgcaggccaccttcggagaggcggag
acgagagcccaggccacagagcagcgctacaccaagctaaaggagaagcacactgagctg
gtgtccagccatgctgaactgctcaggaagagtgcagacactgtgaagattctgtcagca
acacagcagacccaggaggaggtggagaggaccaagcagcagctggctttcgaggtggat
cgcatcaaactggacgctgacatgaagcttgaggagcagaagtttgagatgaagaagctt
aaaagggattttgatgaaaagcgggctgaggtggaacatgtcaaaggcactctgcagcgc
actgagaaggtgggggaacagctgaccagctctatgttggcgctgcaggcggagaaagag
cgcctgatgcgctctgcgagtgaaaaggaggccgagctgtcgtccctgagccaggctgca
cagctgcagcagtcttctctacagcaggagagagagcggagcaccagggagctgggagag
ctgcagggcaagctgcaggagaagtcaagacgtgaggtgcagttgcagcagaagctgctg
gaggagcagttctccctgctgcagggaacggtctctgaggctgagtgcatcattcaggat
gctgtggccaagctggacgaccccctgcatatccgctgcaccagctccccagattacctg
gtcagtcgggcagaggccactttgggctccattgacaaagtgaaaaaaggtcactccgac
tacctgacgaacatgggagatgctggtgggctactgagggccctgaccaacttctcccac
ctggctgctgacaccatcatcaacggcagtgcaacagcacacttggctcccactgaccac
tccgaccgtctgacagagaattgcaggggctgtgccactcagagtctgcagttcctgaag
gatctcaagtccaaggcctcccttcagagggcagacccggcctccattcgcatagtggtt
gaaaagatcctgaggctgggggaggagctgcgacctaaaggcatggatgtgcgacaggat
gagctgggagatctggtggacaaggagatggcagccacatcagccgcaattgagaaggca
gtgcgcagaatcgatgaaatgatgaaccaggcccgaatggacacctcaggggtcaaactc
gaggtcaatgagagaatcctctacagctgcacagacctgatgaaggccatccacctgttg
gtcctgacatccaccgacctacagaaggagattgttgagggtggaaggggtgcagccact
attaaggaattctacgccaggaactcccgttggactgagggactcatctctgcctccaaa
gctgtgggatggggagctacgcagatggttgagtctgctgataaggtggtgctgcacact
ggcaaatatgaggagctcattgtctgctcccacgagattgctgccagcacggcacagctg
gtcgcatcctccaaggtaaaagcagaccgcaacagtacgaaactgacagctctccagcag
gcttctcgccatgtgaacgagatggcagccaatgtggtggcctccaccaagacaggccag
gagcacctggaggacaaggataccatggacttctctggaatgtctctcatcaagctaaaa
atggaagaaatcgagtcacaggtgaaggtgttggagctggagaatcagctgggtaatgag
cgtctgcgcctgggagagctcaggaagaagcactatgatattgcaggtgttccagcagca
gacctctcagagggcaacggcctggacccctcgcctgcccctgttgcaccctcctcaccc
aaaccctccaagcctagtgtcatgaggaaacctgacttggctcagaaacccaacttaccg
cctaaaaatatgttcaggtag
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