Salvelinus namaycush (lake trout): 120022990
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Entry
120022990 CDS
T07522
Name
(RefSeq) rho GTPase-activating protein 5-like
KO
K13709
Rho GTPase-activating protein 5
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120022990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120022990
Membrane trafficking [BR:
snh04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
120022990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP_pG1_pG2
RhoGAP
FF_RHG35_4th
RhoGAP-FF1
Ras
FF
GTP_EFTU
NOG1
Cdh1_DBD_1
Motif
Other DBs
NCBI-GeneID:
120022990
NCBI-ProteinID:
XP_038822869
UniProt:
A0A8U0TPF3
LinkDB
All DBs
Position
Sna28:complement(14391199..14464058)
Genome browser
AA seq
1502 aa
AA seq
DB search
MAKNKEARPLTYAVSVVGLSGTEKEKGNCGVGKSCLCNRYVCSNADGYYTEHTSVLSTID
FGGRVVNNDHFLYWGEVPHRSDDGLECKIQIIEQTEFIDDQTFLPHRSTNLQPYSKRAAA
SKLQSAEKLMYICTDQLGLEQDFDQKQMADGKLNIDGFLLCIDVSKGCNRKFEDQMKFVN
SLYSQMVKSKKPIVIAATKCDECMEQYLRDLQVFAASKKNLLVVETSARSRINVDLCFNA
LTQQMDKPRGKPKIIPYLEAYKVQRQLVATVSDKFEKRIVQTVRDYHTSWKTVSNMLKNH
PDYEEYINLEGTRKARNTLNKHIEQLKQEHIRKRRAEYFSSLPKILNNLLNNLEELENLS
WSEAQSILKSRAEFHFWFVVLEHTPWDETDQIDKVNDRRVPFDLLKTLEGEKIFQNHVQH
LFSEKMRLEMKNRFKKTLDRVHFISPGQPWEEVMCFVMEDEAYKYISESDRRDVYSQHQQ
EIVERAKEEFQEMLFEHAELFYDLDLNATPSCDKMSEIHTVLNEEPRYRALQKLAPDRES
LLLKHIGFVYHPTKETCLSGQSCVDINVEQVLANRLVQLDHGRSNLYYNSANIDKVNLCL
LGREGLAQELANEIRAQSTDDEYTLDGKIYELELLPVDVNSTLLFSHTWASTFKPHGIFC
VFSSIESLNCIGDCVGRIRAEIAQNRRERYAPPLPFILILANQRDSVCKNMPILRHQGQQ
LANKLQCTFVDIPSATFPRKFNEFQIKQALRGVLEGLKHNFDVMSPLPSIKDMSETDLRI
VMCAVCGDPFSVDLILSPFLDSHSCSAGQPGQSNTLILNKIIGDSRRRIQVTVLSYHSSI
GIRKDELVHGYILVYSAKRKSSMAMLRAFLAEVQDVIPVQMVAVTDSQADFFENDPIKDL
MTEGEHIATEITAKFTALYSLSQYHRQTEVFTPFFNEVLEKKSSIESAFMFDSSRDCTGA
SEDVFPQSPHSHSPAYSYYPDSEDDTEAPPPYSPIGDDVQLLPTFSERGKCRIDLEGNEY
PVHNTPVGDQERNHRVPPPVRPKPILSKPNVKKLDPNLLKTIEAGMRSNRRQRSPMAHGE
DVEASDNYADPVDTLLKSKGFIDNIYAVPEDTHSRTLKMRNSFEGLHVLHGDEENGFDHK
AQASRRPSKYKHRSKILFSKTKMYHRRVHSDVSDDESGPAMQKKKKGRAHRGSEEDPLLS
PADPWKGGIDNPAITSDPEQDDMKKKKKKTPKTKEPKKPKSKATKPLYPPTRRNWESHYF
GVPLQNLVTPDRPIPLFIEKCVDYIERTGLTTEGLYRVSGNKTDQDNIQKQFDQDHSMDL
IVMDVAVNAVAGALKAFFSDLPGPLIPYTLHPELVEAAKIVDHIERLQVLKEIVRNFPAV
NYKVFKYVITHLNRVSQQSKTTLMTADNLSICFWPTLMRPDFENKDTLSTTKLNQSVIES
FIQQSHYFFYGGDIQESSSTESTPPPHHCHSMVEALRPLQLPPPLQPQQIQHSMSLQPEP
LI
NT seq
4509 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaacaaggaggcacgccccctaacatatgctgtcagtgttgttggcctctca
gggacagagaaggagaagggcaactgtggcgtgggcaagtcctgcctatgcaacagatat
gtgtgttccaacgctgacggctactatactgagcacacttctgtgttgagcacaattgac
tttggaggtcgcgtggtgaacaatgatcacttcctctactggggtgaagtgccacaccga
agcgatgacgggctcgagtgtaaaattcaaatcattgaacaaacggagttcattgatgat
cagactttcttgccacatcgcagcacaaacctgcagccctatagtaaaagggctgcagcc
tccaagctacagtctgctgagaagctgatgtacatttgcaccgaccagcttggcctggaa
caggattttgatcagaagcagatggccgatgggaaactgaacattgacggttttttattg
tgcatagacgtgagcaaaggctgcaataggaaatttgaggatcagatgaaatttgtcaac
agcctttattctcaaatggtcaaatcgaaaaagcccatcgtcattgctgcaactaaatgt
gacgagtgcatggagcagtatctaagggaccttcaggtgttcgctgcaagcaaaaagaac
ctcctggtggtagaaacgtcagctcgatctagaatcaatgtagacctctgttttaacgcg
ttgacccagcagatggacaaaccacgaggcaaacccaaaatcattccttatttggaggcc
tataaagttcagcgacagttagtagccacagtgtccgacaagtttgaaaagaggattgta
caaaccgtcagagattatcacacaagttggaaaacagtgagtaacatgttgaaaaaccac
cctgactatgaggaatacatcaacttggaaggcacccgaaaagctagaaacaccctcaac
aagcacatcgaacagctgaagcaggaacatatcaggaaaaggagggcagaatacttctcg
agcctgccaaaaattctcaataacttgctcaacaacttggaagaactcgagaacctgagc
tggtcggaggctcaaagtatcttgaagagcagggctgagtttcatttctggtttgtggtg
ctggaacacactccgtgggatgagacggaccaaattgacaaagtcaacgacagaagagtg
ccctttgatctcctcaaaacgttggaaggggagaagatttttcagaaccatgtccagcat
ctgttctcagagaaaatgcggttagaaatgaagaatagattcaagaagacattggataga
gtccatttcatcagccctggacaaccctgggaagaggtcatgtgttttgtcatggaggac
gaggcctacaagtatatcagtgaatctgatcgcagggatgtttacagccagcatcagcag
gaaatagttgaaagggccaaagaggaatttcaggaaatgctttttgaacacgcagagctg
ttttatgaccttgatttaaacgccaccccaagctgtgacaaaatgagcgagatccacact
gtgctcaacgaggagcccagatacagagccctgcagaaactggccccggacagggagtca
cttcttctcaagcacatcgggttcgtctaccaccctacgaaggagacgtgtctgagtgga
cagagctgcgttgacataaatgtcgagcaggtactggctaacaggctagttcagctggac
catggtcgctctaatctctactataacagtgccaacattgataaagtcaatttgtgtctc
ttgggaagggagggtctcgcacaagaacttgcaaatgaaatccgagcccagtccacagac
gatgagtacaccctggatgggaaaatatatgaactggagcttctgcctgttgatgtcaac
tcaacgttgctctttagccatacgtgggcgtcgaccttcaaacctcatggaatcttctgt
gtcttcagctccatagagtcgctaaattgtattggcgactgcgtagggcgaatcagggca
gagattgcacagaacaggagggagagatacgctccaccattgccattcattctaatccta
gcaaaccagagagacagtgtttgcaaaaatatgcctatcttaaggcatcagggccaacag
cttgcaaataagctacagtgcacctttgtagatataccttctgctacctttccacggaag
tttaacgagttccaaattaaacaggctctcagaggagtattagaaggactaaagcacaac
tttgatgtgatgagccctctgccatccatcaaagacatgtcagagacagacttgaggatt
gttatgtgtgccgtgtgtggggatccatttagcgtagacctcatcctctcacctttcctc
gattcacattcctgcagcgctgggcaacctggccaaagtaacactctgatcctcaacaaa
atcatcggcgacagtcgcagaagaatacaggtcactgtcctctcctaccactcctccatc
ggaatcaggaaggacgagctcgtccatggatacatcctggtctactcagcaaaacgcaag
tcctccatggcgatgctcagagctttcctggcggaggtccaagatgtcattcctgttcaa
atggtggccgtcacagacagtcaagcagacttctttgagaatgacccaatcaaagacctc
atgactgaaggggagcacatcgctacagagataaccgccaaattcacagctctctactct
ctgtctcagtaccatcgtcagacggaagtcttcacgccgttcttcaacgaggtgctagag
aaaaagagcagcatcgagagcgccttcatgtttgacagctctcgagactgcacgggtgcg
agtgaagatgtcttcccccagtctccccacagccattcccctgcttacagttactaccct
gactcagaggacgacacagaggcccctccgccttacagccccatcggggacgacgtgcag
cttcttccaacgtttagcgaacgtggaaagtgcaggatcgatctggaggggaacgagtac
cctgtccataacacacctgtcggtgaccaagagcgcaaccacagagtgcctcccccggtt
agacccaagcctatactatccaagcccaacgtcaagaagttggaccccaatctcctgaag
accattgaggctgggatgaggagcaacagacgacaacgcagccccatggcccacggtgaa
gacgtcgaggcgtccgacaattacgcagaccccgtagacactctcctgaaatcaaagggc
tttatcgacaacatctacgctgtcccggaggacacccacagcaggaccctcaaaatgcgc
aactcgtttgaggggcttcacgtcttacacggggacgaggagaacggctttgaccacaag
gcgcaggccagcaggaggccctccaagtataagcaccgctcaaaaatactcttcagcaaa
accaagatgtaccacagacgtgtccactccgacgtcagcgatgatgagtctgggccggcc
atgcagaagaagaagaagggcagggcccatcggggcagcgaggaagaccccctgctgtcc
cctgcggacccctggaagggagggatagacaaccctgccatcacctctgatccagagcag
gatgacatgaagaagaaaaagaagaaaacgccaaagacaaaggaacctaaaaagccaaaa
tccaaggccacaaaacctttgtaccctcccacacggaggaattgggagagccactacttt
ggtgttcccctacagaacctggtcaccccggaccggccaatccccttgttcattgagaag
tgtgtggactacattgaacgcactggacttacgacagagggcctgtatcgcgtgagtggt
aacaagactgatcaagacaatattcagaagcagtttgatcaagaccacagtatggacctg
atagtgatggatgtggctgtgaatgctgtggcgggggctctgaaggcctttttttctgac
ctacctggccctctcatcccctacaccctgcacccagagctggtggaggcagccaaaatt
gtggaccacatagaaagactccaagtgctgaaagaaatagtaaggaatttccctgcagtg
aactacaaggtgtttaaatacgtcatcactcacctgaacagggtgagccagcagagtaag
accaccctgatgacggccgacaatctatccatctgcttctggcccacgctgatgcgtccc
gactttgagaacaaggacacactctccaccaccaagctcaaccagtctgtcatcgagtcc
ttcatccagcagagccactacttcttctacggcggagacatccaggagagctccagcacc
gagagcaccccaccaccccaccactgtcacagcatggtggaggccctgaggcccctgcag
ctgccccctcctcttcagccccagcagatccagcacagtatgtccctgcagcctgaacca
ctcatatag
DBGET
integrated database retrieval system
