Salvelinus namaycush (lake trout): 120023009
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Entry
120023009 CDS
T07522
Symbol
hivep2b
Name
(RefSeq) transcription factor HIVEP2
KO
K09239
human immunodeficiency virus type I enhancer-binding protein
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120023009 (hivep2b)
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
120023009 (hivep2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_jaz
zf-met
zf-C2H2_4
zf-H2C2_5
SF3a60_Prp9_C
zf-C2H2_2
OrsD
Motif
Other DBs
NCBI-GeneID:
120023009
NCBI-ProteinID:
XP_038822888
UniProt:
A0A8U0TP63
LinkDB
All DBs
Position
Sna28:complement(7405906..7412389)
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AA seq
1627 aa
AA seq
DB search
MEDRGSLEGEGEFYSDAEQSSDTDEDDSSLLDTVSVEEPDSTTAVKVLNLVAQKQGVTLA
STLSEDGPPRLLEISAAQAPAVSQVSRAIQSSAIKQRLALRLSEKRSSDTDTSLSLPSQG
SKGSTDSGYFSRSESAEHQTGGPPNTNAKSYQEIMFGKCYKPNPKQQAITVVTCRTDLMS
DRKTSERGVSRVFTQEKESMVESIRINTHSFTREDIKEAQLELSDSGQLVRSNSMPTSSV
ACQDMSQGLRGSHSFDERASPGGIRRLTRQAAFEHSAHDGPPDHYGNISDISNLGVEMES
FTIQQKQAMEYATRKRRKENCVAEEEDVGGQYHTDYDHSEEMRDYDSKQTSQGALTTTSS
VKGHAQSVHTQDRTQCDRLEREMWEKREREERRSLGNVISVIQHTNSLTRSLSEQSDSYN
YQRQDKPSSMDVVEQTETREMHKRTEIFAHQLSDSRLLDKSYQMTPKLVRQSNIPVPEIR
VTVEPDSPEKEKASEVKQVKVKEPDRHIEEFQWPQRSETLSQFPPEKLPPKKKRLRLADL
EHSSGESSFESACTSLSRSPSQDSNLSYCSSFSFDREEKEREVIPKPASPAARQDEFGKA
LEFLAVPGSGYSLSILNQRQQHEMRRTSSEQAPCHSQCRELPEVRSVSFDYGSLSPTAKV
RHAELSASYSEPRRGNLVRQESLNVNLEFAHPVLPLNILPQYLSSALSFSATALHSQSLP
MFAPQPSHSGLLVPVRIQTHVPSYGSITYTTVSQIVDDPFEGVNSTRTSFLTSHFANLAT
NLDTSNLLLGHPRGLLTSPVQVQVLDLPPAKLKTGIPLSLTSRTISTTNCGSSGGSNKRM
LSPASSLDLFMEVKQQKRVKEEKMYGEIVEELGAVELGNYNVTEENKHSLKSEFQSDTNQ
GASLSGFPSKSSLSASSSLHSHNEPARGSVISPQQQGSESPDSPMDNSPTEASLHPHALL
SLKDFNESGMDSKAQMEVLVQLVKGQGILISDGENTKRISQFPSLRTMTAVSWCYLNYTK
PNSTHSSSPLSSVYATWCISSHNPNPPNLNTRATLALLRSKQTTNTWVYTMAAMYQPGTG
KLVSSSLLWRQRLGLLQSKPEFNELEGSSYGRKVKDASCRGKARKEDWKEREVSSKQTPT
PTPTPTPAPTRIKIFEGGFKSNEDYVYVRGRGRGKYICEECGIRCKKPSMLKKHIRTHTD
VRPYVCRVCNFAFKTKGNLTKHMKSKAHMKKCRELGVSVTVDDTETLESDDIQQDLKTGV
LSTAKHQFSDADDSDGMDEEIDDIDEDDDDDDDYDGDSTPKILSRSTSPQPCGVASLSVT
ATAVIQGVSSDIHGCPLSTFHPLPSCLSTYTLPSVDIHPHPTSTLPGIDVHPHPHPPSTV
RRTGPDRRTVLASSLDKENCSLAMLSPDQGCLFFDPYPTCLLSPGWESPLREPPNSRLGY
LSPRGDLSPRGRSSPRWDTSPLRPSSPNLTPIQHLFPVCMERPLSPGGVDLAGRRQRVVL
RAVSPRRGGSQHRDSGDKTRQQAKAELVQQGGAIEMDMDQRRSVPPCLPGPTCSSCPRQN
LFSHLPLHSQQQAGTLLPMVPIGGIQVLRSLPSCSSGRTHLNPKQEEVLQTCTKAIASLR
ITSEEHL
NT seq
4884 nt
NT seq
+upstream
nt +downstream
nt
atggaggaccggggatctttagaaggagaaggagagttctactctgatgctgagcagagc
tcggacacggacgaagacgattcatcgctcttggacactgtttcagtggaggaaccagat
agcaccactgctgttaaagtactgaatctcgttgcccagaaacagggagttacattagca
tcaacattatctgaggacggtccacccaggctcttggagatcagtgctgctcaggctcca
gctgtttctcaggtcagccgtgcgatccaatctagcgccatcaagcagcggctggcacta
cggctctcagagaaaaggagcagtgacactgacacatctctctccctgcctagccaggga
agcaaaggcagcacagactcaggctacttctcacgctctgagagtgctgaacaccaaaca
ggtggtcctcccaacacaaacgccaagtcctatcaagagataatgtttggaaagtgttac
aagccgaacccaaaacaacaggccataactgttgtgacttgcaggacagacttaatgagt
gatcgtaagacttcggagcgaggtgtttcccgcgtattcacacaagaaaaggaatcaatg
gttgaatcgatcagaataaacacacattcatttacaagggaggacattaaggaggctcaa
ctagagctctctgattctggacagctggtccggagcaactcgatgcccacgtcctcggtg
gcatgtcaggacatgtcacaaggcctgcgaggcagccactcctttgatgaaagggcgtcc
cctggaggcattaggagacttacgagacaggctgcctttgaacactctgcacacgatgga
cctcctgaccactacggaaacatctctgatatttccaaccttggagtggagatggaaagt
ttcaccatccaacaaaagcaagcgatggaatatgcgacgaggaaacggcggaaggaaaac
tgtgttgcggaggaggaggatgtaggaggccagtatcacacagactatgaccactctgaa
gagatgagggactatgattcaaagcaaacctctcaaggtgctctaaccactacatcctca
gtgaaaggacatgcccaaagcgtgcacacacaggatagaacacaatgtgatagactggaa
agggaaatgtgggaaaagagagagagagaagagagaagatctttaggtaacgtcatctct
gtgattcaacacactaactcccttaccaggtctctctctgaacagtcagattcttacaac
taccagagacaggataagccttcctcaatggatgtggtggagcaaaccgaaactagagag
atgcacaaaaggactgagatctttgcacaccagttgagtgacagtagattattagataag
tcgtatcaaatgacacctaagctagtccgtcagtctaacataccggttccagagatcagg
gtgactgtagaaccagacagtccagagaaagagaaagcatctgaggtaaaacaggtgaag
gtgaaggagcccgatagacatatagaggagttccaatggcctcagaggagtgaaacactg
tctcagttccccccagagaaactccctccaaagaagaagagactgcgcttagctgacttg
gagcactcctctggcgagtctagcttcgagtcggcttgtacgagcctctcccggagcccc
agtcaagacagcaatttatcctactgctccagcttctcatttgaccgagaggagaaagag
agagaggttatccctaagccagcttccccggcggctagacaggatgagtttggcaaagcg
ttggagttcttagcggtgccaggaagcggctactccctctctatcctgaaccaacgtcaa
caacatgaaatgagacgtacctcttcagaacaggcaccgtgccactcccagtgcagagag
ctcccagaggtccgcagtgtatcgtttgactacggcagtctctctccaacggccaaagtt
agacatgcggaactcagcgccagctactcggagcccagacggggtaacttggtaagacag
gagtccttgaatgttaaccttgaatttgcacatccagtccttccgctaaatattcttcct
cagtacctcagcagtgccctgtcgttctcagccaccgctctgcactctcagtctctgcca
atgttcgcccctcagccgtcacactctggtctcctagttcctgttagaatccagactcac
gtgccatcctatggtagcatcacatacaccactgtgtcccaaattgtagatgatccattc
gaaggcgttaactccaccagaacctcttttctcacttctcacttcgcaaatttagccacg
aatttggacacatcgaatctattattaggacaccctcgaggactgttgaccagcccagtc
caggttcaagttctggatctgcccccagctaagctgaagacaggcattcctctctccctg
acctccagaacaatctccaccaccaattgtgggtccagtggtgggtccaacaagcgcatg
ttgtctccggccagcagcttggacctgttcatggaggtcaaacagcagaaacgcgtcaaa
gaggagaaaatgtacggtgagatagtggaggagttgggtgctgtggagttagggaattat
aatgtgactgaagagaacaagcacagtttaaagtcagagtttcaaagtgacaccaaccag
ggagcatcactgtcaggctttccttcaaaatcctctttgtctgcgtcatcctcgcttcat
tctcataacgagccagcaagaggaagcgtcatctcacctcagcaacaagggtcagaaagt
cctgattcccctatggataactccccaacagaagcaagcctacatccacacgctctgctt
tctctgaaggatttcaatgagtctggcatggacagcaaggcacagatggaggtgctggtg
cagctagtcaaaggtcagggcatcctcatctctgacggggaaaacaccaaacggatatct
caatttccaagtctccgcacaatgacagctgtgagttggtgctatctgaactacaccaag
ccaaacagcactcacagcagctctcccctgtcctctgtgtacgctacgtggtgcatcagt
tcccataaccccaaccctcctaacctcaacaccagagccaccttggctctgctccgctcc
aaacagacgactaacacatgggtatacaccatggctgccatgtaccaacctgggactggg
aagctggtctcctcctcactcttatggaggcagcggctcgggctgctacagagcaaaccg
gagttcaacgagctggaagggagctcttatggacggaaagtgaaggatgccagctgcagg
ggaaaagcaaggaaggaggactggaaagagagggaggtctcctcgaaacaaacaccaacg
ccaacaccaacaccaacaccagcaccaacccggatcaaaatatttgaaggagggttcaag
tccaatgaggactatgtgtacgtgagaggccgaggccgggggaagtatatctgtgaggag
tgtggcatccgctgtaagaaacctagcatgctgaagaaacacatacgcacccacactgac
gtcagaccctacgtctgcagggtctgcaacttcgctttcaaaactaaaggaaacctgacc
aagcatatgaagtcaaaggctcacatgaagaagtgtcgtgaacttggtgtgtcagtcaca
gtggatgatacagagacactggaatctgatgacatccagcaagacttgaagaccggggtc
ttgagcacagccaaacaccagttctcagatgcagacgactccgatggcatggatgaagag
atcgatgatatcgacgaagatgacgatgacgatgatgactacgacggtgactctactccc
aagatcctttcccggagcaccagccctcagccctgtggcgtagcctctctgtcggtcaca
gctaccgccgtcatccagggtgtgtcgtcagacatccatggctgtcccctcagtaccttc
catcccctccccagctgcctctcaacctacaccctgcctagcgtcgatatccacccccat
cccacctccaccctgccaggcatagatgtccacccccatccccatcccccctccacggtc
aggaggacagggccagaccggagaactgtcttggcctccagcctggacaaggaaaactgt
agcctggccatgctgtctcctgaccagggctgtctgttcttcgacccatatcccacctgt
ctgctgtcccccggctgggagtcccctctgagggaaccgcctaactcccgcctcggctac
ctctccccccggggagacctctccccccggggacgctcctcacctcgatgggacacctcc
ccgctaaggcccagctcccccaacctcacccccatccagcacctcttcccggtctgtatg
gagaggcccctgtccccaggtggagtggacctggctgggaggagacagagggtggtgctc
agggctgtgtctccacgtagagggggctcacaacatagagactccggggataaaaccagg
cagcaagccaaggctgaactggttcagcagggaggagccattgaaatggatatggatcag
aggagaagcgtgcctccctgcctgcctgggccaacctgctccagttgtccccgtcagaac
ctcttcagccacctccccctacactctcagcagcaagctgggactctcctacccatggtg
cctatcggagggatccaggtactgcgctccctgccctcctgcagctctggccggacccat
ctgaaccctaagcaggaagaggttcttcagacctgcaccaaggccatcgcctccctcagg
atcacctctgaagagcatctatag
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integrated database retrieval system