Salvelinus namaycush (lake trout): 120023034
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Entry
120023034 CDS
T07522
Name
(RefSeq) ras and Rab interactor 3-like
KO
K23687
Ras and Rab interactor 2/3
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120023034
Membrane trafficking [BR:
snh04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
120023034
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
RA
RA_3
SH2
RA_2
TUG-UBL1
Motif
Other DBs
NCBI-GeneID:
120023034
NCBI-ProteinID:
XP_038822912
UniProt:
A0A8U0PDM7
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Position
Sna28:9830070..9844461
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AA seq
1150 aa
AA seq
DB search
MSSLVPELSSSELTLPAPSSQPVPKPSSMLISAPTVAPISKPSSLPISSPHVPPIAKPPL
STPPIPPLSKPSVPPSPRVPPFSKISSPPLPRPSAPRKLSGPPQPRPPVPHPHSIAKPSS
PALPRPPLLSMKSSSPPLPSPLVPLAPKPAPASASSPAPSPTQATAPRPSISILEKLIKT
CPVWLQLGMAQERTTLILKKEVPGIFLVRKSPDQKSMVLSVCVSDKQVELQVQDVLIKEE
KSLIYLEGSVLVFDNIFKLIAFYCVSRDILPCTLRLPQIIVQATKYEDIEMISTLGSDFW
GSQLHSASEMVKRDDQGQDHSSSSCEIQLSTGKSNDRLWYINPIFIEEYCSSLEASTLVP
APIHRSQSLNTPGLVQVPPKFKRPPPRPPNVPEGLILSQGAKQGARGESVSPRSPPPPRT
VIAKAAGQKAEGDSSKDTEGEGAASQLLLEKAVSVTVTDSVAATQPLQPLSPHGGTTGQK
HPAPRPPPHRIPLVPLRRKPSENRPSIPGQEGGVGPVPVASLVCIDDTTNMAEEKLGVES
HAGETETLQNKGTSRASNISEVVTVATAPLTKRAAHPVPPPRKKKPSQFTPTSPLSRNVI
SGGHLSINSSSDTPQNSSTPSPASRPTSIPVGEARGTDVSLYSPDGEAVFPALEHDSYST
SSTEEEADTVASRAGGTGGTNNTKVLMKRTPTIMLDRAKHRLSSVFTNFMNIDHKLQKRI
LELSRDRSSYFGTLVKDYRVYILETMGKHSSSTELLQEIRQMMTQLKSYLIQSTELQNLL
EPNIYTEDKLEVIIEAALCKVMLKPLREAVYSGLKDIHARDSCLKRLRENQSVVLGTTTT
ELGISTSVPETPVMEKIQLKLMTLHQEYSPQKKIDLLLKTCKIIYESMSIGCPAGRAHGA
DDFLPVLMYVLARCNMAFLLLDVEYMMELMDPALQLGEGSYYLTTTYGVLEHIKNYEKQV
VTRQLSLEIQNSIHRWEKRRTLNKASVSRSSVQDFINVSFLEAGCNTKTLRVRPNTTAQD
LCSQCADKFEVAEPESYSLSVLVEGHHQPLAPEEFPLTIKSSLHHSQPLKEYYFVYRPGR
TESEGQEAESQEAEGQEAEGQEAESQEAESQEAESQEAEGQEAEGQKVESEEPAPAAEPE
PEEEESLIEI
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctttagtcccagagctctcctcttcagaactaaccctaccagcaccttcatct
cagccggtcccaaagccctcatctatgctcatctctgctcccactgtagctcccatctca
aaaccctcctcacttcctatctcttctccccacgtacctcctatagcaaaaccccctctg
tccactccccccattcctcctctctcaaaaccctctgtacctccgtctccccgtgttcct
cctttctcaaagatctcctcaccccctcttcctagaccctcagcacctcgaaaactctct
ggtccaccccagccgagaccccccgtacctcaccctcactcgatagccaaaccctcctct
ccagctctccccagacccccacttctatccatgaagtcctcctccccccctctaccctcc
ccactagtccctctagctcccaagcccgccccagcttcggcctcatcaccagccccatct
ccaacccaagccacagccccacgacctagcatcagtatcctggagaaactgatcaaaact
tgcccggtgtggttgcagctgggtatggcccaggagaggaccacactcatactgaagaaa
gaagtacctgggatatttttagtgcgtaaaagccccgaccagaaatccatggtgctgtca
gtatgtgtatctgacaagcaggtggagcttcaggtccaggatgttctgattaaggaggag
aagtcactgatctacctggaagggtctgttctggtctttgacaacatcttcaaactcatc
gccttctactgtgtcagccgggatattctaccctgcaccctgaggttgcctcagatcatt
gtccaagcaaccaagtacgaagatatagagatgatatcgacattaggctcagatttctgg
ggttctcagcttcacagcgcctcagaaatggtcaaacgtgatgaccagggtcaggaccac
agcagttcgtcctgtgagatccagctgtccaccgggaaaagtaatgaccgtctgtggtac
atcaaccccatcttcatcgaggagtactgcagcagcctggaggcctccaccctcgtccca
gctcccatccacaggagccagagtctgaacaccccaggcctggtgcaggtaccccccaag
ttcaaacgccccccacccaggcccccaaatgtcccagagggcttgattctgtcacagggg
gctaagcagggtgccagaggggaaagtgtctcccccaggtctccaccgccaccgcgaaca
gtaatagccaaggcagcaggtcagaaagcggaaggagacagcagcaaagacactgaggga
gagggagctgcttctcaactcctcttggagaaagcggtgtcagttactgttactgactca
gtagcagctactcagcctctacagccactgtcaccgcacggaggaacaacaggacagaaa
cacccagcaccccgaccacccccacacaggataccactcgtaccccttcggcggaaaccc
tcagagaaccgtccctcaatcccgggacaggagggcggtgttggtccagtgcctgttgct
tcactggtctgcatcgatgacaccactaacatggcagaggagaagttaggagtggaatcc
catgctggtgagacagagacactgcagaacaaagggacatcaagggcttcaaacatcagt
gaggttgttaccgtggctacagccccactgacgaagagggccgcacatccagtcccgcct
cccaggaagaagaaaccctctcagttcacgcccaccagtcctctctcccgaaatgtgata
agtggaggacatctgtcaatcaattcatcatctgataccccccagaactccagcaccccc
tcgcctgcctcgaggccgacctccatccccgtgggggaggccagggggacagatgtgtcc
ttgtactcccctgatggtgaagctgtcttccctgccctggaacatgactcctactctacc
agcagtacagaggaggaggctgacactgtggccagcagggctggagggaccggtgggacc
aacaacaccaaggtgttgatgaagaggacccctaccatcatgctggaccgagccaagcac
cgcctctccagcgtgttcactaacttcatgaacatcgaccacaagctccagaagagaatc
ctagagctgtccagggacaggagctcctacttcggcaccctggtgaaggactacagggtg
tatatcctggagaccatggggaagcacagctccagcactgagctgctgcaggagatcagg
cagatgatgacccagctgaagagttacctcatccagagcactgagctacagaacctactg
gagcccaacatctacacagaggacaaattagaggtgattattgaggctgccctgtgtaag
gttatgctgaagcctctgagggaggctgtgtattcaggcctgaaagacatccacgccagg
gacagctgtctgaagagactgagggagaaccagagtgtcgtcctgggtaccaccaccaca
gaactggggatctccaccagcgtcccagagacccctgtcatggagaagatccagctgaag
ttgatgaccctccaccaggaatactcccctcagaagaagattgatctgctccttaagacc
tgcaagatcatctatgaatccatgtctataggctgtccagcagggagagcccatggtgca
gatgacttcctcccggtgctgatgtacgtcctggccaggtgcaacatggccttcctgcta
ctggatgtggagtacatgatggagctgatggaccctgcactgcagctaggagagggctcc
tactacctgacgactacgtatggagtgttggagcacataaagaactatgagaagcaggtg
gtgacacggcagctcagtctggagatccagaactctatccaccgctgggagaagagacgc
accctgaacaaagccagcgtgtcacgttcatctgttcaggacttcatcaacgtgtcattc
ctggaggcagggtgtaacactaagaccctgagggtccgccccaacaccacagcccaggac
ctgtgttcccagtgtgctgacaagtttgaggtggcagagccagagtcctacagcctgagt
gtgctggtggagggccaccaccaacccctggcccctgaggagttccccctcactatcaag
tccagtctccaccacagtcagcccctcaaggagtactactttgtctaccggcctggaagg
acagagtcagaaggacaggaggcagaatcccaggaggcagaaggacaggaggcagaagga
caggaggcagaatcccaggaggcagaatcccaggaggcagaatcccaggaggcagaagga
caggaggcagaaggacagaaggtggagagcgaggagccagctcccgcagccgagccagaa
cctgaggaggaggagagtctgatcgagatatga
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