Salvelinus namaycush (lake trout): 120023092
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Entry
120023092 CDS
T07522
Symbol
trappc12
Name
(RefSeq) trafficking protein particle complex subunit 12
KO
K20309
trafficking protein particle complex subunit 12
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120023092 (trappc12)
Membrane trafficking [BR:
snh04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
120023092 (trappc12)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_12
TPR_6
TPR_8
TPR_17
ANAPC3
TPR_16
ARM_TT21_N
ARM_TT21_2nd
Coatomer_E
TPR_11
RPN7
CCDC22_CC
TPR_10
TPR_9
Motif
Other DBs
NCBI-GeneID:
120023092
NCBI-ProteinID:
XP_038822984
UniProt:
A0A8U0TN88
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Position
28:complement(32650496..32668998)
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AA seq
834 aa
AA seq
DB search
MDNNETPAQRPVTLDITGTVEVKPSLSEAPISPEPSLLPSSDVHFQEESIDLGGESFITP
EEDSHSTPSESLMDKLNDQMMESVMISDSPINSEEDDVVPMDNLLEQFEEREEEPAAAVV
KETLVEEEKEEVGEKVDDLIGQDTTEIKIEAAMMQTSPVASSPEEPLENVKQKLTTVDQD
VITVSVSAVTPEDSTPSSGSPKPEAAALEASSKETTSKDESIPVCTIFSQGSQPKAQALV
PDGFQPTLIKSPSFSSGTGGSTEITPSQLAPLVCQPSPSLSKFFSDSGHVNPATDFFDSF
TTSSFISISNPNAESPKSAAPPERQLSASSGSSLSTSGLTESGIPTPSSFIGPTQTEATP
RPLQQAPVEPAPATAPQPFTQLQAVFSGGDDPFATALNMSEADKRYDAWLPSEETRKVLI
SMATQQYSQVFVERERLAMPGLKFDNLQGDAVKDLMVRLMGEQAAMKRQVLTANSVEQSF
LGLKQLISTKNWRAAVDLTGRLLTAHGQGYGKAGQPSSHNTDSLQLWFVRLALLTKLSLF
QNAEMELEPFGNLDQPDLYYEYYPTVYPGRRGSMVPFSMRVLHAELPQYLGKPQESLDRL
HSMRTVCQTILDNLEQGLAEDGSMINLTQENRQASLQLWKSRLSRVMYAMANCLLMMKDY
VLAVETYHSIIQYEPQQKVQLLSGIGRIFLQIGDIKTAEKYFLDVEKASLEKGSGTTDTC
VLMNRAFIYLSQNNYSEAHSSFAEVLKIDPKNPVANNNAAVCLLYLGRLKESLRQLEGLV
QQDPALYLHESVLFNLTTMYELESSRSTQKKQALLESVACREGDSFNTQCLKLV
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggacaacaacgagactcctgcccagaggccagtcacccttgacatcacagggacagtg
gaggttaaacccagcctgagtgaagcccctatctctccagagccatccctccttccctcc
tctgatgtccatttccaggaggagagcatcgacctggggggcgagtccttcatcactccc
gaggaggacagccacagcacgccctcagagagcctgatggacaagctcaatgaccagatg
atggagagtgtcatgatctctgactcccccatcaacagtgaggaggacgatgtggttccc
atggacaacctgctggagcagtttgaggagagggaggaggagccagcagcagcagtggtt
aaagaaaccttagtggaggaagagaaggaggaggtgggggagaaagtggatgatctgatt
ggacaagacactactgagatcaagatagaggctgcgatgatgcagacaagtccagtagcc
tctagtcctgaggaaccattggagaatgtgaaacagaagctaaccactgttgaccaggac
gttatcactgtctctgtctctgctgtaaccccagaggacagcacccccagctcaggcagc
cccaagcctgaggcagcagccctggaagccagcagcaaagagaccacatccaaggatgaa
tccatccctgtgtgcaccatcttcagccagggcagccagccaaaagcccaggccctggtg
ccggatggcttccagcctaccctcattaaatctcccagcttcagtagtggcaccgggggg
agcacagagattacccccagtcaactggctcccctggtctgccagcccagccccagcctc
agcaagttcttctctgacagtggccatgtcaacccagctactgacttctttgactccttc
actacctcctccttcatctctatcagcaaccccaacgcagagtccccaaagtcagccgcc
ccacccgaacgccagctctctgcttcctctgggtcctctctgtccacctctgggcttacg
gagtccggcatccccacccctagctccttcattgggcctacccagactgaagccaccccc
aggcctcttcaacaggctccagtagagccagccccggccacagcccctcagcccttcacc
cagctgcaggcagtgttctcggggggagatgacccgtttgccacggcactgaacatgagt
gaggctgataagaggtacgatgcctggctgccttctgaggagaccaggaaggtgctgatc
tccatggcaacgcagcagtacagccaggtgtttgtggagagggagagactggccatgccc
ggactcaagtttgacaacctgcaaggtgatgctgtgaaggacctgatggtgcgtttaatg
ggggagcaggcagctatgaagagacaggtccttacagccaactctgtagaacagtccttc
ctgggcctcaaacaactcattagcacgaagaactggcgtgctgcggtggacctgacaggc
agactgctgacagctcatggtcagggctacggtaaggctggccagccctccagccacaac
actgactcactacagctgtggtttgttcgcctggccctgctcaccaagctgagcctgttc
cagaacgctgagatggaactggagccgtttggaaacctggaccaacctgacctctactat
gaatactatcctaccgtataccctgggaggagaggctccatggttccgttctcgatgcgg
gtgctgcatgcagagctgcctcagtacctggggaaaccacaggagtctctggacagacta
cacagcatgaggaccgtctgtcagaccatcctggataaccttgagcagggcttggctgag
gacggcagcatgatcaacctcacccaggagaacagacaagcatctcttcagctgtggaag
tctcgtctgagtcgggtcatgtacgccatggctaactgtctgctcatgatgaaggactat
gttctggctgtagagacatatcactccatcatccagtacgagcctcagcagaaagtacag
ctgctgagtgggataggacgcatattcctgcagattggagacattaaaacagccgagaag
tatttcctagatgtggagaaagcctctctggagaagggaagtggaactacagacacatgt
gttttgatgaacagggccttcatctacctcagtcagaacaactactcagaggcacattcc
tcgttcgcagaggtcctaaagatcgaccccaaaaaccctgtggcgaataacaatgcagca
gtgtgcctgttgtacctgggccgtctgaaggagtcgctgagacagctggagggcctggtg
caacaggacccggccctgtacctccacgagagcgtccttttcaacctgaccaccatgtac
gagctggagtcgtcccgctccacccagaagaaacaggccctgctggagtcagtggcctgc
cgagagggagacagcttcaacacacagtgcctcaaactggtgtag
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