KEGG   Salvelinus namaycush (lake trout): 120023094
Entry
120023094         CDS       T07522                                 
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:snh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120023094
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:snh03041]
    120023094
   03400 DNA repair and recombination proteins [BR:snh03400]
    120023094
Spliceosome [BR:snh03041]
 Complex B
  Other components
   Prp19 complex
    120023094
 Complex C
   Prp19-CDC5 complex
    120023094
DNA repair and recombination proteins [BR:snh03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    120023094
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect Rap1_C
Other DBs
NCBI-GeneID: 120023094
NCBI-ProteinID: XP_038822987
UniProt: A0A8U0PDS1
LinkDB
Position
Sna28:20142175..20151565
AA seq 806 aa
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK
TEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEFLLDKAAQRDNEEDTADDP
RKLKPGEIDPNPETKPARPDPVDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR
RLAALQKRRELRAAGIDAQKKRKKKRGVDYNAEIPFEKKPSQGFYDTSMELYEGLEPNFK
RLRQQHLDGELRNEKEERERKRDRQKIKKKKESDLPSAILQTSGVAEFTKKRSKLVLPAP
QISDAELEEVVKLGQASEVARQTAEESGITNSASSALLSEYSLSNSAMATGLRTPKTPAA
QDKILQEAQNLMALTNVDTPLKGGLNTPLHQSDFSGVTPQRQAVQTPNTVLTTPFRTPGP
GSEGGMTPQGALTPKGPGTVTPGVTPGRTPLRDKLNINTEEQLADPAYARHLQRESREQL
KLGLMSLPIPKNDFEIVLPENAETELEEMETETGYMEDASEIELRKQAARDAEQEKELKL
RHTAVQRILPRPSEVNESILRPLGTDPLSELQQAEEMLKKEMITMLHFDCLHHPPANQQR
SKQRGPASTSNNAEHIAHLDRHPYKPISNEELAHASELLSQEMEVVKAGMGHGDLSMEAY
SQVWEECYGQVLYLSAQSRYTRANLASKKDRIDSLEKKLEINRGHMTCEARRAARLERRL
KVLLGGYQSRAVGLLKQHGELWEQVEQAATELHTFTELKKQEDTAIPRRQEALREDVERQ
QEREKELQQRYGDLLLEKEALLSAKY
NT seq 2421 nt   +upstreamnt  +downstreamnt
atgccgcgtatcatgatcaaggggggtgtatggcgaaacaccgaggatgagatactgaag
gcagcggtgatgaaatatgggaagaaccagtggtctcgtattgcctccctgctgcaccgc
aagtctgccaaacagtgcaaagcccgctggtatgagtggctggatcccagcattaagaaa
actgagtggtccagagaagaagaggagaagctgctccacctggccaagcttatgcccacc
cagtggaggaccattgctcctatcataggacgcaccgctgcccagtgtctggagcactac
gagtttctactagacaaagcagcccagagggacaatgaggaggatacagctgatgatccc
aggaaactgaagcctggagagatcgaccccaaccctgaaaccaagcccgctaggcctgac
cctgtggacatggacgaagatgagctggagatgctgtccgaggccagagctcgtctggcc
aacactcagggcaagaaagccaagaggaaggccagagagaaacagctggaggaggccaga
cgactggctgctctacagaagcgcagggagttgagggcagcaggcatcgacgctcagaag
aagaggaagaagaagagaggagtggactacaatgctgagattccctttgagaagaaacct
tctcagggtttctatgacaccagcatggagctctacgaaggtctggaaccaaacttcaaa
cgcctgcgacaacaacacctggacggagagctacgcaatgagaaggaggagagggagagg
aagagggatagacagaagatcaagaagaagaaggaaagtgatcttccatcagccatcctc
cagaccagcggagtagcggagttcaccaagaaacgcagcaaactggtgctgcctgcacca
cagatctctgatgcggagctggaggaggtggttaagctgggtcaggccagtgaagtggct
cgtcagaccgctgaggaatctgggatcactaactccgcctcctcagccctactgtcagaa
tacagcctttccaacagcgccatggcaactgggctacgcacccccaagacccctgctgcg
caggacaagatactacaggaggcccagaacctgatggctctaactaacgtagacactcct
ctgaaaggaggtctgaacactcctctccaccagagtgacttctcaggagtcacaccccaa
agacaggcagtacagacaccgaatactgtactgaccacacctttcagaaccccgggtcca
gggtctgagggcggtatgaccccccagggagcgttaacccctaaaggaccgggtactgtg
acccctggagtaacccctgggcgcacccctctacgagacaaactcaacatcaatactgag
gaacaactagcagaccctgcctacgctagacatctgcaacgagagtcgagggagcagctg
aagctgggtctgatgtcgctgccgatccccaagaacgactttgagatcgttctaccagaa
aacgcagagactgaactggaggaaatggagacggagactggatacatggaggatgcctca
gagatagagctacgcaaacaggctgcccgggatgcagagcaggagaaagagctgaagctg
agacacactgctgtacagaggattctacccagaccatcagaggtgaatgagtctatcctg
cgtccgttgggaacagatcctctgtcagaactgcagcaggctgaggagatgctcaagaag
gagatgatcactatgctgcactttgactgtctacaccacccaccagccaaccaacagcgc
agcaaacaacgagggcctgcctccacctccaacaacgcagaacacatcgcccacctggac
agacacccctacaagccaatcagcaatgaggagctggcacatgccagtgagttgctgagc
caggagatggaggtggtgaaggcaggtatgggtcatggggacctgtccatggaggcctac
agccaggtgtgggaggagtgttacggccaggtgctgtacctctccgcccagagccgctac
accagggccaacctggcctccaagaaggaccgcatagactccctggagaagaaactagag
atcaaccgaggccacatgacgtgtgaggcccgtcgcgctgctcgtctggagcgtcgtctc
aaggtgttactaggagggtaccagtcccgtgctgtaggcctactgaagcagcatggtgaa
ctgtgggagcaggttgagcaggcagctacggagctccacaccttcactgagctgaagaaa
caagaagacacagcgataccccgcagacaagaggctctaagggaggacgtggagagacag
caggagagagaaaaggagcttcagcagagatatggagacttgctgctggagaaagaagct
ctgctgtctgctaaatattaa

DBGET integrated database retrieval system