Salvelinus namaycush (lake trout): 120023098
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Entry
120023098 CDS
T07522
Name
(RefSeq) VPS10 domain-containing receptor SorCS1-like
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120023098
Membrane trafficking [BR:
snh04131
]
Protein recycling
Others
Others
120023098
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
PSII_BNR
Motif
Other DBs
NCBI-GeneID:
120023098
NCBI-ProteinID:
XP_038823000
UniProt:
A0A8U0PDX3
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Position
2:67936596..>68099552
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AA seq
1138 aa
AA seq
DB search
MPFRSKNALLGGGMHYGGGKQRKFTPRGEYKVSNLKMNLHAGNTDVGKARADLIPGITHK
HRVRRNSPRANIGDDKVKSSGSPKRREALPLSYSREGITSPAGRSRVTRSELRWSNEDRR
AASSRQDELKLTSSTFALTGDSAHNQAMVHWSGQNSSVILMLTKLFDFNLNSVTESSLWR
STDYGTTYQKLNEKVGAKTILSYLYVSPNNKRKIMLLTDPEVESSLLISSDEGATYQKYR
LSFYILSLLFHPEQEDWILAYSHDQKLYSSVEFGRRWQLVHERVAPNRFYWSKTGLDKEP
GLIHLETIISEGQALYVTCKLQNCTEANKGKPFPGYIDPNSLVVQDEYVFVQVSTGGRPI
YYVSAKREVFTPMKLPKYTLPKDLHVISTDENRVVAAVQEWNQNDTYNLYVSETGGVFYT
LALENVVSSMGHEGNVMIDLYEVAGIKGMFLANKKMDNVVKTYITYNRGRDWRLLQAPTA
DLRGNSIRCELPYCSLHLHLHVSANPYTSGNIESKDSAPGIIVASGSIGAELTTSNVSMF
ITSDAGNTWRQIFDEEYSVLYLDQGGALVAIRHTPLPIRHLWMSFDEGRQWNKYSFTMSP
LFVDGLLGEPGEETLIMTIFGHVSHRSEWQLVKIDFRSIFNRRCTEGDYQTWHLHNRGEP
CIMGVKRIYRKLKPIARCVMGKTYSVTMTSAPCDCTEADFECDYGYERRSDGKCTPAFWF
LPSSMSRSCTTGTTFINSTGYRKVVSNNCTAGVIAEYTARRQHCPTQAPKGLHLVTSEGK
LTATLGTNVTFLVFLEEGDGARTSIMVDFGDGHALTYSNVSSIEDGVKHVYKAVGIYRVT
ATGENSLGSESVVLYLHVTCQLEYIHLSAPFVVVKSKEVNLTAVLWPSQVGTVTYIWWFG
NNTEPIITLEGSVACTFSREGVNTVTVQVSAGNAILQDRKTIAVHEYFRSHLLAFSSNLD
DHNPDVAEWRLDVSRVIKNSMVKATGVSPELLLVTVLPGLPTAAEFFLLPDKELTEGKPE
KNSAHLDQLSEILLSALNQNLVQFTLRPGVQVTVYAAHLSAAPLVDTSENHSGSAMLMLL
SVVVLGLAIFVVYKFKRKIPGLNVYAQMQNEKEQEMIPSPVSPTESTLVSPNTPRELV
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgccgttccgttccaaaaacgcactactcggtggaggaatgcactacggtggtggtaaa
cagagaaaattcaccccgcgcggcgagtacaaagtttccaacctgaaaatgaaccttcat
gcaggaaatacagatgtcgggaaggctcgcgcagatttaattcccggcatcacacacaag
caccgagttcgtaggaacagcccgagagctaatattggggatgataaagtgaagtcctcc
ggctcacccaagagaagggaggcgctgcctctgagttactctcgagagggcatcacctca
ccggctgggcgcagcagagtgacacggtccgaattgcgatggagcaacgaggacaggaga
gcggccagttcgaggcaggacgaactcaaactcaccagttcaaccttcgctttgaccgga
gattccgctcacaaccaagccatggtgcactggtctgggcaaaatagcagtgtgattctc
atgctgaccaagctgtttgacttcaacctgaacagtgtcacagagagctcattgtggagg
tcaaccgactacggaaccacttaccagaagctcaatgagaaagtgggggcgaaaacaatc
ctcagctacttgtacgtcagtcccaacaacaagagaaagatcatgcttctgactgacccg
gaagtggaaagcagcctgctgatcagctccgatgagggagccacctatcagaagtaccgc
ctcagcttctacatcctcagcctgctcttccaccccgagcaggaggactggatccttgcc
tacagccatgaccagaagctgtacagctcggtggagtttggaaggaggtggcaacttgtc
catgagagggtggcccccaatcgattctactggtccaaaacgggtttagacaaagaaccg
ggcttaattcacctggaaaccataatctctgaaggacaggcgctgtacgtcacctgcaag
ctgcagaactgcaccgaggccaataagggcaagccgttccctggctacattgaccccaat
tcccttgtggtgcaagacgagtatgtgtttgtccaggtgtcaactggtgggcgtccaatc
tactacgtgtcagccaagcgggaagtcttcacacccatgaagctacccaaatacaccttg
cctaaggatctgcatgtgatcagtacggatgagaaccgggtggttgcggcggtgcaggag
tggaaccagaacgacacctacaacctgtacgtgtcagagactggaggggtcttctacacc
ctggccctggagaacgtagttagcagcatggggcacgagggcaacgtcatgatagacctg
tatgaggtggcgggtataaaagggatgttcctcgccaacaagaagatggacaacgtggtg
aagacttacatcacctacaacagagggagagactggaggctactgcaggctcccactgct
gacctgaggggcaacagcatccgctgtgaactaccatactgttccctacacctccaccta
catgtgtcggccaacccctacacgtcggggaatatcgagagcaaggactctgccccgggg
atcattgtggcctcaggctccatcggagcggagttgaccaccagcaacgtgagcatgttc
atcacctcggacgccggcaacacgtggagacagatctttgatgaggagtacagtgttctc
tacctggaccaaggaggggccctggtggctataagacacactccactccccatccgacac
ctatggatgagtttcgacgaggggagacagtggaataaatacagtttcaccatgtctcct
ctgtttgtggacggattactaggggagccgggggaggagactctcatcatgacgatcttt
ggccacgtcagtcaccggtccgagtggcagctggtcaagattgacttcaggtccatcttc
aaccggagatgtacagagggggattaccagacatggcacctacacaaccggggcgagccg
tgcatcatgggagtgaaaagaatctacaggaagttgaagcccatagccaggtgcgttatg
ggtaagacatactcggtcacgatgacctcggcgccctgcgactgcacagaggccgacttt
gagtgtgactatggctacgagaggcggagtgacggcaagtgcacccccgccttttggttc
ctcccatcgtccatgtctagaagctgtaccacagggactactttcatcaacagcactggc
tacaggaaggttgtgtccaataactgcacagcgggcgtgatagcagagtacacggccagg
aggcagcactgtcctacccaggcccccaaaggcctgcacctcgtcaccagtgaaggaaag
ctgacagctacgctgggcaccaatgtcaccttcctggtgtttcttgaagagggcgacgga
gccaggaccagcatcatggtggacttcggggacggtcacgctctgacctactccaacgtg
agctccatagaggatggggtcaagcacgtctacaaggctgtggggatctaccgtgtgacc
gctacaggagagaacagcctggggtcggagagcgtggtgctgtacctccacgtcacatgt
cagctggagtatatccatctctccgctccctttgtggtggtgaagagtaaggaagtcaac
ctcaccgctgtgctgtggcctagccaagtgggaacagtcacctacatctggtggttcgga
aataacactgagccgataatcaccctggaagggagcgtggcgtgcacgttctcccgggaa
ggcgtcaacactgtcaccgtgcaggtgtccgctgggaacgccatcctgcaggaccggaaa
accatcgctgtccacgaatatttcaggtcacatctactagccttctcatctaacctggat
gaccacaaccccgacgtggccgaatggagactggacgtcagcagagtcatcaagaactcc
atggtcaaagccacaggggtgagcccggagctgctccttgtcaccgtcctaccagggttg
cccacggcagcagagtttttcctcctgccagacaaagagttaacggagggcaagccagag
aagaactcagctcatttagaccagctctctgaaatcttgcttagcgccctcaaccaaaac
ctggtccagttcacccttcggcctggggtccaggtcacagtatacgctgcacatttgtca
gcagcgcccctagtggacacgagtgagaaccacagcggctcggccatgctgatgctgctg
tcggttgtggttctgggtttggcgatatttgtcgtctacaaattcaaaaggaagatccca
ggcctcaacgtctatgcgcagatgcagaacgaaaaagaacaagaaatgatcccgagtcca
gtaagtccgacggaaagcaccctggtgtccccgaacactccgagggagctggtg
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