Salvelinus namaycush (lake trout): 120023126
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Entry
120023126 CDS
T07522
Symbol
rtf1
Name
(RefSeq) RNA polymerase-associated protein RTF1 homolog isoform X1
KO
K15178
RNA polymerase-associated protein RTF1
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snh03021
]
120023126 (rtf1)
Transcription machinery [BR:
snh03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
120023126 (rtf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plus-3
Motif
Other DBs
NCBI-GeneID:
120023126
NCBI-ProteinID:
XP_038823034
UniProt:
A0A8U0TPL0
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Position
Sna28:1695456..1729633
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AA seq
701 aa
AA seq
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MVNVKKRKGRVVIDSDSEDSASDDNLDQELLSLATKRKRVDSDDQQDDQQDDQQDNQPVS
KPAASSDSETSDSDDEWTAGGPKVKKKVKPGKPTATEKKKEAAKKRVHKAASSGSSGGDS
SADSSAPEEGEVSDSESNSSASSSDSSSEDDVFRDGYGEDLMGDEEDRARLEQMTEKERE
QELFNRIEKREVLKRRFEIKKKLKTAKKKEKEEKKKKHEEEHKKRERSSSGHHEDRSHQD
QQVVMSHNKERRTKRDEKLDKKSQAMEELKAEREKKKTRTAELLAKRLPLKTSEVYSDDE
EEEEEEDDDKSSVKSDRSSHSSSYSEDEEKEETPPKSQPVSLPDELNRVRLSRHKLERWC
HMPFFQKTVNGCFVRIGIGNSSSKPVYRVAEIVDVVETAKVYQLGTTRTNKGLQLRHGGD
TRVFRLEFVSNQEFTENEFMKWKEAMIIASMQVPTLDEINKKEQAIKEACNYKFNDKDIE
DIVKEKDRFRKAPSNYAMKKTSLLKDKAMAEESGEGDRAKEIQDQLNELEERAEHLDRQR
TKNISAISYINQRNRSWNIVESEKALVAEGQNAKLQMDPFTRRQCKPTMVSNARDPSVHA
AILQHLNEKYGEGSGKEMDLEFEMGRGAGQAALKVIDPTKNTSDLSEDLFKVHDFDVKID
LQVPNAEAKSLSVSANTLAVKDGAPRRSLNLEDYKKRRGLI
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggtgaatgtaaagaaacggaaaggtcgagtcgttatcgactctgactctgaagacagc
gctagtgatgataatttagatcaggagctcctgtctctggccaccaagaggaagagggtg
gactcggatgaccagcaggacgaccagcaggatgaccagcaggacaaccagccggtcagc
aagcccgcagcctcatcagactcagagacatcagacagtgatgatgagtggaccgccggt
ggtcctaaagtcaagaagaaggtcaagccagggaaaccgacggcaacagagaagaagaaa
gaggcagcgaagaagagggttcataaagctgcttcgtccgggagttctggtggagacagt
tctgctgacagctctgcccccgaggagggtgaggtgtctgactcagagagcaacagctct
gcctccagctcagactcctcgtcggaggacgatgtcttcagggacggctacggagaggac
ctgatgggagacgaggaggacagggctcggctggagcagatgactgagaaggagagggag
caggagctcttcaacagaatagagaagagggaggtgctcaagaggagatttgaaattaaa
aagaagctgaaaacagcgaagaagaaggagaaagaggagaagaaaaagaaacacgaagaa
gaacacaagaagcgtgagagatcatccagcggtcatcatgaggaccgaagtcatcaggac
cagcaagtggttatgtctcacaacaaggagaggagaactaaacgggatgagaaactagat
aaaaagtctcaggccatggaggaactgaaagcagagagagagaagaagaaaaccaggaca
gcggagctcctggcgaaacggctgcccctgaaaaccagcgaggtttactcagacgatgag
gaggaggaagaggaggaggatgacgacaaatcatctgtaaagagcgatcgcagttcacac
tcttcatcttattccgaagacgaggagaaagaggagacgccaccgaagtcgcagcccgtg
tcactaccagacgaactgaaccgcgtgcgtctgtcccgacacaaactggagcgctggtgt
cacatgccgttcttccagaagaccgtgaacggttgcttcgtacggataggcatcgggaac
agtagtagcaaaccagtttacagggtggctgaaatagttgacgtggtagagacggctaag
gtgtaccagttgggaacgacccggacgaacaaaggactacagttacggcatggtggtgac
acccgagtcttcagactggagtttgtgtccaatcaggagttcacagaaaacgagttcatg
aagtggaaagaggcgatgatcatagccagtatgcaggttcccactctagatgagatcaat
aagaaggagcaggccatcaaagaggcttgtaactacaaattcaacgacaaagacatagag
gacatcgtaaaagagaaagaccgattccgaaaggcgccttccaactacgccatgaagaaa
acatcactactcaaagacaaggccatggctgaggagagtggagaaggagaccgagccaaa
gagatccaggaccagctgaatgagttggaggagagggccgagcatctggacagacagagg
accaaaaacatctctgccatcagctacatcaaccagaggaatcggagctggaacattgtt
gagtctgagaaagccctagtggcggagggacagaatgccaagctgcagatggacccgttt
actagacggcaatgcaaaccaaccatggtgtctaacgccagagacccttcagtccatgca
gctatcctccaacacctcaatgagaagtacggagaagggtcgggcaaagagatggacttg
gagtttgagatgggcaggggagcgggacaggctgctctgaaagtcatcgacccgactaag
aacaccagcgacctatcagaggacctctttaaagttcacgactttgacgtcaagatcgac
ctacaggttcccaatgcagaagccaagtctctgtcagtgagcgccaacaccctggcagtg
aaggacggcgctccacgtaggtctctcaacctggaggactacaagaagaggaggggcttg
atctaa
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