Salvelinus namaycush (lake trout): 120023133
Help
Entry
120023133 CDS
T07522
Name
(RefSeq) VPS10 domain-containing receptor SorCS3-like
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120023133
Membrane trafficking [BR:
snh04131
]
Endocytosis
Others
Others
120023133
Endosome - Lysosome transport
120023133
Endosome - Golgi transport
120023133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
DUF7828
Motif
Other DBs
NCBI-GeneID:
120023133
NCBI-ProteinID:
XP_038823045
UniProt:
A0A8U0PE00
LinkDB
All DBs
Position
2:complement(69053061..69278449)
Genome browser
AA seq
1252 aa
AA seq
DB search
MDTWLGFCPGLHLTLCTWLLISAHTQLNAKAEITCASCQSPVQLHLKELQLDTGTHAADG
TRQAAKALEQVRLEYQLLGVTDQNTGVPSDTQQAGVLVNEPRFTSDGVTPKVALEDLTGS
SENEERYRGEYNIGVDDLGKVKDGAVDVALRRAKRSGPEPPEFRDSLRTGGPGLEGETSD
ERRSPGPLLDGHRLGRSEFKWNRDEGRGTSRGDDPKLSSATFALTGDSAHNHAVVYWSGQ
NSSVILILTKLYDFHLGSVTESTLWRSTDYGSTYERMNDKVGSKTVLSYLYVCPSNKRKI
MVLTDPEFESSVLISSDEGASYQKYRLSFYILSLLFHPTQEDWALAYSHDQKLYASLDFG
RKWQLVHEHVNRFYWSVTGLDKESDLVHMEAHTPNGRIQYVTCRALTCSEPNRNYPFPGY
IDISSLVVQDDYMFIQVTTAGQASYYVSYQRDPFLKIKLPKYSLPKDLHIVSTDEHQVFA
AVQEWNQNDTYNLYLSDTRGILFTLAMENVKTTRGLGGNQMLDLYEVAGIKGMLIANMRL
DNQVKTYITYNKGRDWRLLQAPATDLAGNDIHCILPFCSLHLQLQTSENPYLSGSISTKA
SAPGIIVATGNIGSDLSYNNVGMFISSDAGNNWRQIFEEEHNVWFLDKGGALVAVKQPTA
PTRHLQISFDEGRQWTRHSFSLVPLFVDGMLVEAGTENQIMTFFGHFSHRSEWQLIKIDY
KSIFNRKCTEGDYQTWHLHNKGEPCVMGQKQIYMKRRPGNYCMLGKDYAKVLSAESCICR
AHDFECDYGYERRREGNCLPAFWFNPAVVSRSCSQGQNYLNSTGYRKVVSNNCIKGVKDM
YTPRKQMCPNRVPKGLSLSTREGKLTADLHTNVTFLVHLDEGDSMRTNIQLDFGDGTAVS
YSNLSWIEEGIRHVYKTAGIFRVSALAENTLGFDTTTLYLHVTCPVEHVQLLAPFVAIKN
KEVNLTAVVWPIHSRTLTYFWWLGNSTEPVISLDGSISYTFTSEGMNTVTVQVSSANAIL
QDTKTIAVQEFFKSLLISFSPNLDEYNPDVPEWRQDVGRVIKKALLQVSDFPEDQLLVAV
FPGVPTAAELFLLPHKNQSEGRKKSEEELEQISEILASALNQNLVEFELKPGARVIVYIT
QLTLAPLVDSSPRHSSSAMLMLLSVVFLGLAVFLIYKFKRKIPWMNIYAEVNQEKEQEMI
GSVSQSDSTPKTTLSEFSTPKEVMEKEMDARVKRRIGNACESTREIPNCTSV
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atggatacttggcttggcttctgcccaggcttgcacttaactctgtgtacctggcttctg
atctccgctcatacccagctaaatgccaaggcggagataacttgcgcatcgtgccagtcg
ccggtccagctacacctgaaggaattacagctggataccggtacgcacgcggctgatggt
acgaggcaggcggccaaagctctggaacaggtccggctggagtaccagctactcggagtt
actgaccaaaatactggagtaccaagcgacacccaacaggcaggtgttctcgtgaatgag
ccgagattcactagcgatggagttaccccaaaagtcgctctggaagatttaactgggtct
agtgaaaacgaagaaaggtaccgtggtgaatataatattggggtggatgatttgggtaag
gtcaaggatggtgctgtggatgttgcgttacggagagcgaagcgaagcggtcccgaaccc
cccgagtttagggatagccttaggaccggtggccccggtttagaaggagagacatcggat
gagagaaggagtcctggtccgttactggacggacacagactgggccgatccgaattcaaa
tggaacagggacgagggtcgagggacttccagaggagatgatcccaaactaagcagcgct
actttcgccttgaccggggactcagcgcataaccacgcagtggtttactggtcggggcaa
aacagcagcgtgatcctgattctgaccaaactttatgactttcacctggggagtgttaca
gagagcaccttgtggagatcaacagactatggctccacctatgagaggatgaatgacaaa
gtgggatctaagacggtgctgagttacctgtatgtctgtccatccaacaagagaaagata
atggtgctgacagaccctgagtttgagagcagtgtgctcatcagctcggatgaaggagcg
agctatcagaaataccgcctcagcttctacattctaagccttctgttccatccaacacag
gaggattgggccttagcctacagccacgaccagaagttgtacgcctccctggactttggg
agaaaatggcagctggttcatgagcatgtgaacaggttctactggtctgtaacgggtcta
gacaaggagtcagatctggtccacatggaggcacacacccccaatggacgtatacagtat
gtaacatgccgggctctaacatgctcagagcccaacagaaattaccccttccctggatac
atcgacatcagctcactggtggtccaagatgactatatgtttattcaggttactacagca
ggacaggccagctactatgtgtcctaccagagggatccattcctcaaaatcaaactgccc
aaatattctctgcctaaggacctccacatcgtcagcacagacgagcaccaggtgttcgcg
gcagtacaggagtggaaccagaacgacacatacaacctgtacctctccgacacccggggc
atcctcttcaccctggccatggagaacgtcaagaccacccgcggcctggggggcaaccag
atgctggacctgtatgaggtagcaggtatcaaaggcatgctgatcgcaaacatgaggcta
gacaaccaggtgaagacctacatcacctacaacaagggccgtgattggaggttgctgcag
gccccggcgacagacctggctggcaacgacatccactgtatactgcccttctgttcgctc
catctccaactgcagacgtctgaaaacccctacttgtcaggcagcatatcaaccaaggcc
tcagcaccgggaatcatagtggccacagggaatattgggtctgacctgtcgtacaataac
gttggaatgttcatctcatctgatgctggtaacaactggagacagatattcgaggaggaa
cacaatgtctggtttctggataaaggaggggcccttgtcgctgtgaaacaaccaaccgcc
cccactagacatttacaaatcagttttgatgaggggcgtcagtggaccagacacagcttc
tccttggtgcctctgttcgtggacgggatgctggtggaggccgggacagagaaccagatc
atgacgttttttggacatttcagccataggtccgagtggcagcttatcaagatagactac
aagtccatcttcaacaggaaatgtacagaaggagactatcagacgtggcaccttcacaac
aagggcgagccgtgtgtgatgggccagaaacagatctatatgaaacgcagaccaggaaac
tattgcatgctgggaaaagactacgccaaagtcctctctgctgagtcgtgtatctgtcgg
gcccacgactttgaatgtgattatggctatgaacggcgtagagaagggaactgtctacca
gcgttctggttcaacccagctgttgtatcaaggagctgcagccaaggacagaactacctc
aacagcacagggtaccgaaaagtggtgtccaacaactgcatcaagggagtcaaggacatg
tacacacccaggaagcagatgtgtcccaacagggttccaaaaggcctttctctctccacc
agagagggcaagcttaccgccgacctgcacaccaacgtcaccttcctggtgcatctggat
gagggtgactcaatgagaaccaacatccaactggatttcggagatggcacggcagtctcc
tactccaacctgagctggatcgaagagggtatcagacatgtttacaagacggctgggata
ttccgtgtctcggctttggcggaaaacaccctgggatttgatactacaacgttgtacctt
catgttacgtgtcctgtggaacatgtccagttgctggctccatttgtggccatcaagaac
aaggaagtaaacctaacagcagtggtctggcccatccactccaggaccctcacctacttc
tggtggctggggaacagcactgagcctgtgatcagcttagatgggagcatctcgtacacc
ttcaccagcgagggaatgaacactgttacggtccaagtgtcttcagccaacgccatactg
caagacaccaagacgatagcagtccaagagttcttcaaatctctgcttatatctttctcc
cctaatctggacgagtacaaccctgacgtccccgagtggagacaggatgtggggagagtc
attaagaaggctctgctccaagtgtcagactttccagaggatcagctattggttgcagtg
tttccaggtgtgccaacggccgctgagctcttcctgttaccacacaagaaccaatcagag
ggcaggaaaaagagcgaggaggagctagagcagatctctgagatacttgccagcgctctg
aaccagaatctggtggagtttgagctaaagccaggagcaagagtcatcgtttacatcaca
cagctaactttggcacccttggtggattccagcccgagacacagcagttcagccatgctg
atgctcctatcagtagtattcctgggtttagcagtgtttctcatctacaaattcaagaga
aaaatcccctggatgaacatatacgcggaggtgaatcaggagaaagagcaggagatgatc
ggttcggtcagccagagcgacagcacgcctaagaccaccctcagtgagttctctacgccc
aaagaagtcatggagaaggagatggacgccagagttaaacggcgaattggaaatgcctgc
gagagcacaagggagattcctaactgtactagcgtgtaa
DBGET
integrated database retrieval system
