Salvelinus namaycush (lake trout): 120023170
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Entry
120023170 CDS
T07522
Name
(RefSeq) RNA-binding protein 25-like isoform X1
KO
K12822
RNA-binding protein 25
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120023170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
snh03041
]
120023170
Spliceosome [BR:
snh03041
]
Complex A
U1 snRNP components
U1 related factors
120023170
Complex B
120023170
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GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
120023170
NCBI-ProteinID:
XP_038823113
UniProt:
A0A8U0TPE2
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Position
Sna28:2104847..2146758
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AA seq
858 aa
AA seq
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MSYPPHLNRLPQLPPGICPPQFAGFPQGVPAGTPMIPVHMGIMTSAPAVLVPTTVSMVQM
SPAPRKELNPVRVKENEEGGGGGPTTTVFVGNISEKASDMLVRQLLAKCGLVLSWKRVQG
ASGKLQGKNKTAFGFCEYKEPESTLRSLRLLHELLLGDKKLLVKVDAKTKAQLEEWKAKK
RSANGGAKSEDGPKEEEDEEEVLDEDTKRRDQIVKGAIEGLIREFGSELNAPSQDGDNQP
RKKKREKKEEEDINVMDIEDDKRDLISREISKFRDTHKKLEEEKGKKEQERQEIDKDRRE
RDKERERERERRDREREKEREKEKERNDNKERERDRDRDRDRIDRDRERTRERGDRGERE
RVKERSREVSKDRSGSRERSRDEKKHDREEDQEEAYERRKLERKMRDKEVAYQERLKNWE
MRERKKARDYDKENQREDERRREMTKEGKRLKEFLEDYDDDKDDLKYYRGSALQKRLRDR
EKETELDERDRKREKEEHDQIRQRLLAEGHPDPEAELQRMEEEAERRRQPPVKPEPEEEV
QQEKPNRDREHREHREREHREREHHRDRRGGGGGGGEDRPPLQHLQPQSDDDLEEGEELD
DCDREDSSDARPNPNLKPTMRPITSAPSVSSGSGGATPNSPGNESPCGIIIPHENSPEAR
PTEEQHPKVGLSLKLGAGASPNHQIHTGSKRKKLSNVDSVFNKFGEEEADEAPRKRKLVP
LDYGEDDKSLGLDGAEVPGGKGGPNTEEKRKHIRSLIEKIPTARPDLFNYPLDWTAVDST
LMERRIRPWINKKIIEYIGEEEATLVDFVCSKVMSHGTPQGILDDVAMVLDEEAEVFIVK
MWRLLIYETEAKKIGLGK
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacccccctcacctgaaccgcctcccccagttgccccccgggatttgccctccc
caattcgcggggttcccccagggagtaccagcaggtacgcccatgattccagtccacatg
gggattatgacctctgcacccgctgtcctggttcctaccacagtgtctatggtccagatg
tctcctgcccctaggaaggaactgaacccagtcagagtcaaggagaacgaggaggggggc
ggtggaggccccaccactacagtgtttgtcggaaacatctcagagaaggcttcagacatg
ctggtcagacagctgttagcgaaatgtggcctggtcctgagctggaagagggtccaaggg
gcttctgggaaactgcaaggtaaaaacaaaacagcgtttggtttctgtgagtacaaggag
ccagagtccaccctgcgttccctgcgtctgctacatgagctgctgctgggagacaagaag
ctgctggtcaaggtggatgccaagaccaaggcccagctagaagaatggaaggctaagaag
aggagtgccaacgggggagccaagtctgaggacgggcccaaggaagaagaggatgaggaa
gaggttcttgacgaagacacaaagcgtcgtgaccagatagtaaaaggggcgatcgagggg
ttgatccgggagtttggcagtgagctcaacgccccttctcaggacggggacaaccagccc
cgcaagaagaagagagagaagaaagaggaggaggacatcaatgtgatggacatagaagat
gacaaaagagacctgatatccagagagatcagtaaattccgagacactcacaagaaactg
gaggaggagaagggaaagaaagagcaggaacggcaagagatcgataaggacaggagggag
agggacaaagaaagggagcgagagagggagcgccgggaccgcgagagggagaaggagaga
gagaaggagaaggaacgaaacgacaacaaggagagagagcgggacagagaccgggatcga
gaccggatcgatcgggaccgtgaacgaacgagggagaggggagacagaggagagagggag
cgcgtgaaagagagaagtcgagaagtcagcaaagaccgcagtggatccagagaacggagc
cgcgatgagaagaaacacgaccgcgaggaggatcaggaggaggcgtacgaacgcaggaaa
ctggagaggaagatgagggacaaagaggttgcctaccaggaacgtctgaagaactgggag
atgagagagaggaagaaggctcgggactacgacaaagagaaccaacgagaggacgagaga
cggcgtgagatgacaaaagaaggcaagcgtctgaaagagttcctggaagattatgacgat
gacaaagacgacctgaaatactacaggggtagtgctttacagaagcgtctgagagatcgt
gagaaggagacggagctggatgagagagacaggaagagggagaaggaggagcatgatcag
atcagacagagactgttagctgagggacacccagaccctgaggccgagctgcagaggatg
gaggaggaggcagagcggaggcggcagcccccagtgaagccggagccagaggaggaggtg
cagcaggagaaaccaaaccgggacagggagcacagggagcaccgagagagggagcaccga
gagagggagcaccacagggacaggagaggaggaggaggaggaggaggagaagacaggcct
cctctccagcaccttcaaccccaatcagacgatgacttggaggaaggggaggagcttgat
gattgtgacagggaggactcgtcagatgccaggccaaacccaaacctgaagcccacgatg
cggccaatcacatcggccccctcggtgtcgtcgggcagcggcggcgccacacccaactcc
cccggcaacgagtctccctgcggcatcatcatccctcatgaaaattctcctgaagcccgg
cccactgaggaacagcatcccaaggttggcctcagcctcaaactgggcgccggcgccagc
cccaaccatcagatccacactgggagtaaacgtaagaagctgtccaatgtcgacagcgtc
ttcaacaagtttggagaggaggaggccgacgaggcgcctcgtaaacgtaagctggttccg
ctggactacggtgaggatgataagagtttgggtctggacggggcagaggtacctggaggg
aagggaggaccaaacacagaggagaaacggaaacacatcaggagtctgattgagaagatt
cctacagccagacccgatctgttcaactaccctctggactggactgctgtggactcgact
ctgatggagcgtcgtatcaggccctggatcaacaagaagattatcgagtacatcggagag
gaggaagctacgctagtcgactttgtctgttctaaggtgatgtcacacggcacaccgcag
gggatcttggatgatgttgccatggttctggacgaggaggcagaagtgttcatagttaaa
atgtggaggctgttgatctacgaaacagaggccaagaagattggtctggggaaatga
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