KEGG   Salvelinus namaycush (lake trout): 120023210
Entry
120023210         CDS       T07522                                 
Name
(RefSeq) striatin-3-like isoform X1
  KO
K17608  striatin 1/3/4
Organism
snh  Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:snh00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:snh01009]
    120023210
Protein phosphatases and associated proteins [BR:snh01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Other PP2-interacting proteins
     120023210
SSDB
Motif
Pfam: WD40 Striatin WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_EML NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_Nup120_160 Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_IP5PC_F Beta-prop_SCAP Beta-prop_WDR75_2nd SOGA1-2-like_CC
Other DBs
NCBI-GeneID: 120023210
NCBI-ProteinID: XP_038823177
UniProt: A0A8U0PF37
LinkDB
Position
Sna28:14574113..14592571
AA seq 706 aa
MDEHPGGGGVGMAAPRPQQQPLGNNNANPQIGGGGGSGMGQQHDEMPRPQQYTIPGILHY
IQHEWARFEMERAHWEVERAELQARIAFLQGERKGQENLKNDLVRRIKMLEYALKQERAK
YHKLKYGTELNQGEVKMPSFESEDTKDTEVPAVPQNSQLTWKQGRQLLRQYLQEVGYTDT
ILDVRSQRVRSLLGLSSSEQNGSVENRNLDQILNGGESPAKRKGHDMKRNPGDVLETFNF
LENAEDSDEDDDEEGDLMEDIDSGKHTIKKHKIKVGNEGLASDLPDDPDTEEALKEFDFL
VNSEDGEGAGEARSSGDGTEWAEPLPFPSGGGKSFIMGSDDVLESVLGLGDLADLTVSND
DADYSYDLPANKDTFRKTWNPKYTLRSHFDGVRALAFHPVEPVLVTVSEDHTLKLWNLQK
TVPAKKSASFDVEPIYTFRAHVGPVLSLAMSSSGEQCYSGGIDHTIQCWNIPSSNVDPYD
TYDPSVLAGTWLGHTDAVWGLAYSGIKNRLLSCSADGTVKLWNPQEKNPCISTYNAEKEH
GIPTAVDFNGCDPAHMVASFNTGNAVIYDLETSQTAVVFAGQGESTLSAANHINKVVSHP
TLPVTITAHEDRNIKFFDNKSGKVIHAMVAHLDAVTSLAVDPNGIYLMSGSHDCSIRLWN
LDSKTCVQEITAHRKKSDESIYDVAFHPSKAYIASAGADALAKVFV
NT seq 2121 nt   +upstreamnt  +downstreamnt
atggatgaacaccccggcggaggaggagttggaatggccgccccaagacctcagcaacaa
ccgctggggaataataacgctaatccccaaatcggtggtggaggtggctcagggatgggg
cagcagcatgacgagatgccacggccacagcagtataccatccccggtattctacattat
atccagcacgaatgggccagattcgaaatggagagagctcattgggaagtggaaagggcc
gaacttcaggctcgaatagcattcctacaaggagaaaggaagggtcaagaaaatttaaag
aatgatctagttcgaagaataaagatgttagaatatgcattaaagcaagaaagagcaaaa
taccataaattaaaatatggaacagaattaaatcaaggtgaagttaagatgcccagcttt
gaatcagaagataccaaagacacagaggtccctgctgtacctcagaatagtcagctgacg
tggaaacagggcagacaactcctcagacaatatcttcaggaagtaggttacacggacaca
atactagatgtgcggtctcagagagtgcgttcgttactgggcctgtccagctcagagcag
aatggctccgtggaaaacaggaacctggatcagatcctcaatggaggagagtctccagcc
aaacgaaagggacacgatatgaaaaggaatccaggagatgttctggaaacatttaacttc
ttagaaaacgcagaggacagtgatgaagatgatgatgaggaaggagacctgatggaggat
atagacagtggcaaacacacaataaaaaagcataagataaaggttgggaacgagggcctg
gcctctgaccttccagatgaccccgacacagaggaggctctgaaggagtttgacttcctg
gtgaattctgaggatggagagggagcaggggaggcccggagttcaggggacgggaccgaa
tgggccgagcccttaccgtttccctcaggtgggggcaagtcctttatcatgggctctgat
gacgtgttggagagtgtcctgggactgggagacctagctgacctcactgtctccaatgac
gacgccgactacagctatgacctgccagccaataaggacacgttcaggaaaacgtggaat
cccaagtacaccctgcgcagccactttgacggggtcagggctctggccttccatcctgta
gagcctgtcctggtcaccgtgtctgaggaccacaccctcaaactgtggaacctgcagaaa
actgtgcctgccaaaaaaagtgcctcttttgatgtggagcctatttacacgttcagagct
catgtggggcctgtgctgtccctggctatgagttccagtggagagcagtgttacagtgga
gggattgaccacacaatacagtgctggaacatccccagctccaacgtggacccttatgac
acctacgaccccagcgtcctggctggaacctggctgggccacacagacgccgtgtggggg
ctggcctacagcgggatcaagaaccgcctgctgtcctgctctgcagacggaaccgtcaag
ctgtggaacccccaggagaagaacccatgcatcagcacttacaatgcagagaaagagcac
ggcatccccactgcggtggacttcaacggctgtgaccccgcccacatggtggcgtccttc
aacacgggcaacgctgtgatctatgacctggagacgtcacagaccgccgtggtgttcgct
ggtcagggggagagcactctgtctgcagccaaccacatcaacaaggtagtgagtcacccc
accctgccggtcaccatcacggcccacgaggacaggaacatcaagttctttgacaataaa
tcgggtaaagtgatccatgcgatggtggcccacctggatgccgttaccagcctggctgtg
gaccccaacgggatctacctgatgtcaggaagccacgactgctctatccgtctgtggaac
ctggacagtaagacctgtgtgcaggagatcactgcccaccgcaagaagtctgacgagtcc
atctatgacgttgccttccacccgtctaaggcatacatagcaagtgccggggccgacgcc
ctggccaaagtgtttgtgtag

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