Salvelinus namaycush (lake trout): 120023217
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Entry
120023217 CDS
T07522
Name
(RefSeq) serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform-like isoform X1
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03015
mRNA surveillance pathway
snh04110
Cell cycle
snh04114
Oocyte meiosis
snh04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120023217
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120023217
04114 Oocyte meiosis
120023217
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
120023217
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
snh01009
]
120023217
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120023217
03036 Chromosome and associated proteins [BR:
snh03036
]
120023217
Protein phosphatases and associated proteins [BR:
snh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
120023217
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
120023217
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
120023217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Dcc1
Motif
Other DBs
NCBI-GeneID:
120023217
NCBI-ProteinID:
XP_038823185
UniProt:
A0A8U0PDZ8
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Position
Sna28:46621450..46658868
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AA seq
527 aa
AA seq
DB search
MLTCTKAGIRMVVDAPTSNGPFQPVALMHFRDCAPAEQEKLFVQKLRQCCVLFDFLSDPL
SDLKWKEVKRAALSEMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDP
EEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVMQLLDLFDSEDPRERD
FLKTTLHRIYGKFLGLRAYIRKHINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLK
EEHKTFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPK
EVMFLNELEEILDVIEPSEFVKVMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLIS
DNAAKILPIMFPALYRNSKTHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFRAEKNKEK
AKSKEREEAWLKIENLAKSNPHCLMCVDSTGLNGPVAMESDGPLTSEEVHRLKKTVTEEA
TQLQQRDQRIDRPLVRLELDLPQDIYTAKALETHRRADDMITTHNGL
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgttgacatgcactaaagctggaatcaggatggttgtggatgcacctacttccaatggg
cctttccagccagtggctcttatgcacttcagagactgtgctccggcggagcaggagaag
ctgtttgtgcagaagctgcgccagtgttgcgtgctcttcgacttcctgtcggacccacta
agtgacctgaaatggaaggaggtgaagcgggcggcgctgagcgagatggtcgagtacatc
acccacaacaggaacgtcatcacagagcccatctaccctgaggtggtgcacatgtttgcg
gtgaacatgttccgaacgttgcctccgtcgtccaaccccacaggagcagagtttgacccg
gaggaggacgagcctacacttgaggctgcatggccacatctccagctcgtctatgaattt
ttccttcggtttttagaatctcccgactttcaaccgaacatagcaaagaagtacatcgac
caaaaatttgtgatgcagcttttagacctgtttgacagtgaggacccacgggagagggac
ttcctcaaaaccactctccacaggatctatgggaaattcctgggactacgggcctacatc
agaaaacacatcaataatatattttataggtttatctatgagaccgagcaccataatgga
attgcagaattactggagatactcggaagtataatcaatgggtttgccttaccactaaaa
gaggagcacaagactttcctgttaaaggtcctgttgcctttgcacaaagtcaaatcactt
agtgtctatcatccacagctggcatactgtgttgtgcaatttctagagaaggatagcact
ctcactgaaccagtggtaatggcacttctcaaatactggccaaagactcacagccccaaa
gaggtgatgttcctcaatgagctggaggagattctggacgtcattgagccgtctgagttc
gtcaaggtcatggagccactcttcaggcagctggcaaagtgtgtgtccagcccgcacttc
caggtagcagagagagctctttactactggaacaatgagtacatcatgagtctaatcagc
gacaatgcagccaaaatcctgcccatcatgttcccggcactctaccgtaactccaagacc
cactggaacaagaccatccatggcctcatctacaatgctctcaagctcttcatggagatg
aaccagaagctgtttgatgactgcacacagcagttcagagcagagaaaaataaagaaaag
gccaagtcaaaagagagggaagaggcctggctcaagattgagaaccttgccaaatccaat
ccacattgtcttatgtgtgttgattccactggcctcaatggaccagtagcaatggagtct
gatggtccattaacctctgaagaagttcacaggttaaaaaagacagtaacggaagaagcc
actcagttacaacagagagaccagagaatagaccgtcctctggtgcggctcgagttggat
ctccctcaggacatctacaccgcaaaagccttggagacccatcgccgcgccgatgacatg
atcaccacccacaatgggctctag
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