Salvelinus namaycush (lake trout): 120023234
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Entry
120023234 CDS
T07522
Symbol
lrfn5a
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
snh04990
]
120023234 (lrfn5a)
Domain-containing proteins not elsewhere classified [BR:
snh04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
120023234 (lrfn5a)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_5
LRR_1
ig
LRR_9
Ig_2
fn3
C2-set_2
Ig_5
Motif
Other DBs
NCBI-GeneID:
120023234
NCBI-ProteinID:
XP_038823209
UniProt:
A0A8U0TNG5
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Position
Sna28:complement(16094059..16099760)
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AA seq
790 aa
AA seq
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MEKLLVCLLVIGMAVKAQICPKRCVCQILSPNLATLCAKKGLLFAPPNIDRHTVELRLAD
NFVTSIKRKDFANMTRLQDLTLSRNTISFITPHAFADLENLRALHLNSNRLTRIANDTFS
GMSKLHHLILNNNQLTLIHLGAFNDLLALEELDLSYNNLESIPWEAIQRMTSLATLSLDH
NMIDYIPEGTFSLLQKLNRLDVTSNKLQKLPPDPLFQRAQVLATSGIMNSPSFALSFGGN
PLHCNCELLWLRRLSREDDLETCASPQHLSGRYFWSIPEEEFLCEPPLITRHSHEMRVLE
GQRVVLRCKARGDPEPAIHWISPEGKLVANSSRTLVYTNGTLDILISTVKDTGSFTCISS
NPAGEAHQTVELLIIKLPHISNSTNNIQEPDPGSSDISTSTRAGANGSNHTGDTKTSTDK
RVVIAEATSSTALIKFNFQRNIPGIRMFQIQYNGSYDDSLVYRMIPPTSKNFLVNNLAAG
TSYDLCVLAIYDDGITSLTATRVVGCVQFTTESEYLRCHFMQSQFLGGTMIIIIGGIIVA
SVLVFIIILMIRYKVCNTSDSGKGTLVTNVHSQTNGAQSQGCTVTPSVSKQAMGGSDGGG
GGCLKAVGHASDTLTHSSETSLPDCSTATSQVTQSWNTPGSSGSLKPKRKAAPKPYTAAA
TPEPNIEALPNAETQNTNRNNSTALQQPSAPVFHSPLPFSPVKDTPILRRAHPRPSSKYL
TLPVEGVRAKRRYSLNEDSSKHHCYVGTTQFGNMWSKRSMSMNGIVLQQEDIDSVKATFS
SSEWILESTV
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaactgctggtctgtctgttggttatcggaatggcagtgaaggcacagatctgt
ccgaagcgatgtgtctgtcaaatactatctcccaacctcgcaaccctctgtgccaaaaaa
gggctcctctttgcccccccgaacattgacaggcacactgtggagctgcgactggccgac
aacttcgtcaccagcatcaaaaggaaagactttgccaacatgaccaggctgcaggacctt
acactgtccaggaataccattagcttcatcacgccgcatgcattcgctgacctggagaac
ctccgcgccttgcacctgaacagcaaccgtctgacccggatagccaatgacaccttcagc
ggcatgtccaaactgcaccacctcatcctcaacaacaaccagctgacgttgatccacctg
ggggccttcaatgacctgctggccctggaggagctggacctgtcctacaacaacctggag
tccatcccctgggaggctatccagaggatgaccagccttgccaccctcagcctggaccac
aacatgatcgactacattcctgaggggaccttctctcttctccaaaagctcaaccgcttg
gacgtgacctctaataagttacagaagctccctcctgatcctctgttccagcgggcccag
gttttggccacgtctgggatcatgaactctccctcgttcgcgttgagctttggtgggaac
ccactgcactgcaactgtgagctgctgtggttgaggcgcctgagccgagaggatgatctg
gagacatgcgcctcaccgcagcatctctccggacgctacttctggtctatacctgaggag
gagttcctgtgtgaacctcctctcatcacccggcactcccatgagatgcgggtgctggaa
ggccagagggtggtcttgaggtgcaaggcccggggggaccctgagcctgccatacactgg
atctccccagaggggaagctggtggcaaactcctcccgaacgcttgtgtacaccaacggc
accctggatattctgatcagcacagtgaaggacacaggatccttcacctgcatctcgtcc
aacccggcgggtgaggcacatcagactgtggagctgctgattatcaaactcccacacatc
tccaacagcaccaacaacatccaggagcctgatcctggctcctcggacatctccacatcc
acaagggctggggccaacggcagcaaccacactggggacaccaaaactagcacagataaa
cgggtggtcatcgccgaggccacgtcctccactgcgctgatcaagttcaacttccagagg
aatatacctgggatccgcatgttccagattcagtacaatggcagttatgatgactctctc
gtttacagaatgattccccccacaagcaaaaacttcctagtcaacaacctggctgctggg
acgtcgtacgacctgtgtgttctggccatctacgacgacggtatcacctccctcaccgcc
acccgtgtggtgggctgcgtccagttcactaccgagtctgagtacctgcgctgtcacttc
atgcagtcccagttcctgggaggcaccatgatcatcatcatcggcggcatcatcgtggcc
tctgtcctcgtcttcatcatcatcctcatgattcgctacaaggtctgcaacaccagtgac
tcgggcaaaggcacccttgtcaccaatgtccactcacagaccaacggggcgcagtctcag
gggtgcactgtcacaccctctgtgtccaagcaggccatgggagggtcagacggagggggt
ggaggatgtctaaaggctgttggccacgcgtcggacacgctaacgcactcgtccgagacc
tctctcccagactgctctactgctacgtcccaggtgacccaaagctggaacacacctgga
tcctcagggtctctgaagccaaagcgcaaggctgcaccaaagccctacactgctgctgcc
acccctgagcccaatatagaggccctccccaacgctgagacccagaataccaaccgcaac
aactccacggctctgcagcagccgtccgctccagtattccactcccccctacccttctcg
cctgtcaaggacacccccatattgagacgtgcacaccccagaccctcctccaagtacctg
accttaccggtggaaggggtgagggccaaacgtaggtactctctaaacgaggactcatcc
aagcaccactgctacgttgggacaacacaatttgggaatatgtggtctaagcggagtatg
tccatgaacgggattgtacttcaacaggaagatatagacagtgtgaaggccaccttttcc
agttcagagtggattctagaaagcactgtgtga
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