Salvelinus namaycush (lake trout): 120023246
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Entry
120023246 CDS
T07522
Name
(RefSeq) estrogen receptor beta-like
KO
K08551
estrogen receptor beta
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
120023246
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120023246
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
snh03310
]
120023246
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
120023246
Nuclear receptors [BR:
snh03310
]
3. Estrogen like
3A. Estrogen receptor
120023246
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GFIT
Motif
Pfam:
zf-C4
Hormone_recep
ERbeta_N
Motif
Other DBs
NCBI-GeneID:
120023246
NCBI-ProteinID:
XP_038823219
UniProt:
A0A8U0PG75
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Position
Sna28:complement(19239781..19279347)
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AA seq
558 aa
AA seq
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MACFPGSGTDTSPLLQVQKVGSNKAPGLLPTIYSPLSGMESSSLCIPSSHTGSSHDYSPV
AFYNHSTLGYSRPTISDNPSLCPPLFWPPHDHGQHNMPPLTHHCPQPLLFSNPNQHAPFE
EPKPLNLTTSSPPLHPTKLPRKNFCAVCNHYASGYHYSVQCCEGCKAFFKRSIKGHKDYI
CPGTNQCTINKNLRKMCRSCRLRKCYEVGMKKCGMRPEHYSFMGARHRRVPQGRGAPGRL
VGVGARAQWNLEGGSLSLLEVHHSSLTPEQLISCIMHAEPPEIYLMEDLKRPFTEARMMM
SLTKLANKELFFMISWAKKIPGFVELSLTYQMHQLESCWLDVLMLGLMWRSIDHPGKLIF
SADLKLNREEGNCVKGIVIIFDKLLAATTRFRELNLQREEYVCLKAMILLNSNICSTSPE
MAEDLESRGKLQLLLDSVTDALVWAISKQGLSFQLQSARLAHLLMLLSDIRHVSGKGMKH
LSDMKNNNIVQVSDLLLEMLTNGSRMSAPHDPSNHDLTVLPAAQAPATTQVPASAVDPQF
QPHSLQPPSQTLESSTSS
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcctgttttcctgggagtgggactgacacttctcccctgctccaggtccagaaggtg
ggctccaacaaggcccctggactcctgcccactatttacagccccctcagtggcatggag
agctccagcctctgcatcccctcttcccacacaggcagcagccatgattacagccctgta
gccttctacaaccactctacgctgggctacagcagaccaaccatctccgacaacccctct
ctgtgtccccctcttttctggcccccccatgaccacggccagcacaacatgcccccgctg
acccaccactgtccccaacccttgctgttcagcaatcccaaccaacacgccccctttgaa
gagcctaaacccctcaacctcaccactagcagccctcccctccaccctaccaagctgccg
aggaagaacttctgtgccgtatgtaatcactacgcttcgggctaccattacagtgtgcag
tgttgtgagggctgcaaggccttcttcaagaggagcatcaaagggcacaaggactacatt
tgtcctgggactaaccagtgcactatcaacaagaacctccgtaaaatgtgccggtcctgc
cgcctacgcaagtgttatgaagtgggcatgaagaagtgtggtatgaggccggagcactac
agtttcatgggggcgaggcacaggcgtgtacctcaggggcggggggcaccaggcaggctg
gtgggggtcggtgccagggcccagtggaatctggaggggggctccctctccctgctggaa
gtgcaccactcatccctgacccctgaacaactgatatcctgcatcatgcatgcggagccg
ccagagatctacctgatggaggacctaaagaggcccttcactgaagccaggatgatgatg
tcactcaccaaactggccaacaaggagctgttcttcatgatcagctgggccaaaaagata
cctggctttgtagagctgagtctgacgtaccagatgcaccagttggagagttgctggttg
gacgtgctgatgcttggtctgatgtggaggtctatcgaccaccctgggaaactcatcttc
tcagcagacctgaagctcaacagggaagaggggaactgtgtgaagggcatcgtgattata
tttgacaagctactggcagccaccaccaggtttcgagagctgaatctccagagagaggag
tatgtctgtctgaaagccatgattctcctcaactccaacatatgctctacctctccggag
atggcagaggatctggagagcagggggaagctgcagcttctgttggactcagtgacagat
gccctggtgtgggccatctccaaacaaggcctgtccttccagctgcagtcagcccgcctg
gcccatctcctcatgttgctctcagacatccgccacgtcagtggcaaaggcatgaagcac
ctctccgacatgaagaataataatattgtgcaggtctccgacctgctcttggaaatgctc
accaacggaagccgtatgtccgcacctcatgacccctctaatcacgacctcaccgtgctc
ccagcagcccaagcccctgccactacccaggttccagcctctgctgtggacccccagttc
cagccacattccctacagccaccatcccaaacacttgagagcagtacatccagctga
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