Salvelinus namaycush (lake trout): 120023250
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Entry
120023250 CDS
T07522
Name
(RefSeq) LOW QUALITY PROTEIN: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1-like
KO
K05858
phosphatidylinositol phospholipase C, beta [EC:
3.1.4.11
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00562
Inositol phosphate metabolism
snh01100
Metabolic pathways
snh04020
Calcium signaling pathway
snh04070
Phosphatidylinositol signaling system
snh04081
Hormone signaling
snh04082
Neuroactive ligand signaling
snh04261
Adrenergic signaling in cardiomyocytes
snh04270
Vascular smooth muscle contraction
snh04310
Wnt signaling pathway
snh04371
Apelin signaling pathway
snh04540
Gap junction
snh04621
NOD-like receptor signaling pathway
snh04912
GnRH signaling pathway
snh04916
Melanogenesis
Module
snh_M00130
Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
120023250
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
120023250
04371 Apelin signaling pathway
120023250
04020 Calcium signaling pathway
120023250
04070 Phosphatidylinositol signaling system
120023250
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
120023250
04081 Hormone signaling
120023250
09140 Cellular Processes
09144 Cellular community - eukaryotes
04540 Gap junction
120023250
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
120023250
09152 Endocrine system
04912 GnRH signaling pathway
120023250
04916 Melanogenesis
120023250
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
120023250
04270 Vascular smooth muscle contraction
120023250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120023250
Enzymes [BR:
snh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.11 phosphoinositide phospholipase C
120023250
Membrane trafficking [BR:
snh04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
120023250
Endocytosis
Macropinocytosis
Phospholipase C
120023250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI-PLC-X
PLC-beta_C
PH_14
PI-PLC-Y
PLCB1-4-like_EFh
EF-hand_like
DUF4277
Motif
Other DBs
NCBI-GeneID:
120023250
NCBI-ProteinID:
XP_038823223
UniProt:
A0A8U0PEQ7
LinkDB
All DBs
Position
Sna28:complement(20069077..20093692)
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AA seq
1204 aa
AA seq
DB search
MAGAQPGTHALKLKPLTVPDTLKNGSCFMKWDDDLSTVTPITLTVDPHGYFLHWTDQNKE
TELLDITHIKDARTGKSTKTPKEAKLRELLDVGNLVGRIENRLLTVVTGADMVNITYLNF
MALQEEEATKWAEELFSLASNLLSHNMNRETSLEKAYVRLTLQPNSEGRIPVKNIVRMFS
ADKKRVETALEHCNLPFGRSNSIPLEDFTPDVYRSFLSHLCPQPELSSVFSQQGAKGAYL
SVDQMTEFINERQRDPRLNEILYPPLRPSQTQTLMEKYEFNQSLLKQGLITLEGFSRYLV
SDENGVIPPEKLDQSEDMTFPLSHYFINSSHNTYLTAGQLAGSSSVEMYRQVMLAGCRCV
ELDCWKGRTAEEEPVITHGFTMTSEICFKEVIEAIAECAFKTSPFPVILSFENHVDSPKQ
QAKMAEYCRSIFGDALLIDPLEKYPLESGVPLPSPQELMGKILIKNKKSHKPPAAHGNKQ
LAEHPANQDAAEEQATDEPSSPSNITADSSLLSGEIEAEDDDDDDDDDCKKTSDEGTAEE
PEAVATEEMSTLVNYIQPTKFNSFEASKKVNRSYQMSSFVETKALEHLTKSPVEFVEYNK
QQLSRIYPKGTRVDSSNYMPQLFWNAGCQLVALNFQTIDLSMQLNLGMYEYNGKNGYRLK
PEFMRRPDKHFDPFAESTVDGIVANTVKVKIISGQFLSDKKVGVYIDLDMFGLPVDTRRK
ALKTKTSQSNAINPVWDEEPIIFKKVVLPTLASLRITAFEEGGKFIGHRIIPVPVILPGY
RYIGLRNEKNQSLILPAVFVYIEVKDYVPDTFADVIEALSNPIRYVNLLEQRSQQLAALT
LEEGEEETSKEIEANADQPGLAEPKANLRSAPLENGLSPSPTVTPRTLTNTPQSAATEPT
KPAAKTENMVQSVLIDMEAATLEELRQHKLIVLEQKRHYREMKDVVKRHQKKTLEMVKEQ
TTKYNQAQNQHTRRHNALLKTKQHGKTRXVGSLSPGGKAEPKQFDEDGEGQLRELREQQQ
QQLLELRQEQYYSEKYLKREHIKQMSEKLTTVTEESQNNQMKKLKDICDKEKKDLKKKMD
KRRTEKIKEAMTKEKHLVEEGKLEINKSYVNEVVQNIKRLEDAQAKRQERLVKQHKDIQQ
QILDEKPKLQGAVEAEYQENFCLLPGEIQDFLQNRKGGVKGHVVPRPSTPHDILSEEELE
DRRK
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atggcaggggctcagccagggacacatgctctgaagctcaaaccgctgacagtccccgac
actctgaagaatggcagctgcttcatgaaatgggacgatgatctctcgacagtgactccc
atcaccctgactgtggatccacacggatactttcttcactggactgatcagaacaaggag
acagagttgttagacatcacccatataaaggatgccagaacagggaagagcaccaaaaca
ccaaaggaggcgaagctgcgtgagctgcttgatgtggggaacctggtcggtcgtatagag
aaccgtctgttgaccgtagtcacaggagcggacatggtcaacatcacatacctcaacttc
atggccctgcaagaggaagaggccacgaagtgggctgaggagctgttctccctggcctcc
aacctgctgagtcacaacatgaacagagaaaccagtctggagaaagcgtacgtcagactg
accttgcagccaaactcagaggggcggatcccagtgaagaacattgtccgcatgttctca
gcagacaaaaagagagtggagacggccttggaacactgcaacttaccctttggacggagc
aactctattccccttgaggacttcacccctgacgtttacagatctttcctctcccaccta
tgtcctcagccagaactcagctcagtcttctctcagcagggtgctaagggtgcttacctg
tctgtggatcagatgacagagtttattaacgagaggcagagagatcctcgtctgaatgag
attctgtatcctcctctcagaccctctcagacacagaccctgatggagaaatatgaattc
aaccagagcctgctcaaacaagggctgatcacattggaggggttcagcagatacctggtg
tctgatgagaatggagtgattcctcctgagaagctagaccagtctgaagacatgaccttc
cctctgtctcactacttcatcaactcctcacacaacacctacctcacagcggggcagctg
gcaggaagttcatcagtggagatgtaccgtcaggtgatgttggcaggctgtcgctgtgtg
gagttggactgttggaaaggacggaccgcagaggaggaaccagtcatcacgcacggcttc
accatgacctcagagatctgctttaaggaggtgattgaggccatcgctgagtgtgctttt
aaaacctctccttttcctgtcatcctgtcctttgaaaaccatgtggactcgccaaagcaa
caagccaagatggcagaatactgtaggtcaatttttggagatgcactactgatagaccca
ctggagaaatatcctctggagtctggggtacccttgccaagtcctcaggagctgatgggt
aagatcctcatcaagaacaagaaatcccacaagcccccggctgcccatggcaacaagcaa
ctggcagagcatccagccaaccaggacgcagcagaggaacaggcaacagatgaaccctca
tctcctagcaacatcacagccgattcttctcttctttcgggggaaatagaggctgaagac
gatgacgatgatgatgatgatgactgtaagaagacttcagatgaagggacagcagaggaa
ccggaggccgtagctacagaggagatgtccactctggtcaactacatccagcccaccaag
ttcaactccttcgaggcttccaaaaaggttaatcgtagctatcaaatgtcatcatttgtg
gagactaaagctctggagcacctcaccaagtcgcccgtggagtttgtggaatataacaag
cagcagttgagtcgtatctaccctaaaggcacgagggtggactcctccaactacatgcca
caactcttctggaatgctggctgccagctggtggcactcaacttccaaacgatagacctg
tctatgcagttgaacctgggcatgtatgagtacaatgggaagaacggctacagactgaaa
ccagagttcatgagaagaccagacaaacactttgacccgttcgctgagagcaccgtggac
ggcatagtggccaacactgtcaaggtcaagataatctcaggccagtttctgagcgacaag
aaggtaggtgtgtacatagacctggacatgtttggtcttcctgtggacaccaggagaaaa
gccctgaagaccaagacgtcccagagcaacgctataaacccagtctgggacgaagaacca
attatcttcaagaaggtggttctccccacattggcctctctgagaatcactgcgtttgag
gaaggaggaaagttcataggtcaccgtattatccctgtgccagtcatactgcccggttat
cgctacatcggcctgaggaatgagaagaaccagtctttgattctgcctgctgtgtttgtc
tacattgaagtgaaggactatgtcccagacacctttgcagatgtaattgaggcgctgtct
aaccccatccggtatgtgaatctcttggagcagcggtcccaacagctggctgctctcact
ctggaggaaggggaggaggagaccagcaaagagattgaggctaatgctgatcaacccggg
cttgctgagccaaaagccaacctacgatctgctcctttggagaacggtctcagccccagc
cctaccgtcacacccagaactctgactaatacaccccagtctgcagctacagaaccaacc
aaaccagcggcgaagactgaaaacatggtgcagagcgttctgatagatatggaagcggcc
acactagaggagctcaggcaacacaagctgatagtgctggagcagaagagacactacagg
gagatgaaggatgtggtaaagagacaccagaagaagactttggagatggtgaaggaacag
accaccaagtacaaccaggctcagaaccaacacacacgcagacacaacgctctcctgaag
actaaacaacatggtaagacaaggtaggtaggaagtttgtcacccggagggaaggctgaa
ccgaagcagtttgatgaggatggagaggggcaactgagggagctgagagaacaacaacag
caacagctactggagttgagacaggaacaatactacagcgagaaatacctcaaacgagaa
cacatcaaacagatgagtgagaaactgactacagtgactgaggaaagccagaacaaccag
atgaagaaattaaaagacatctgtgacaaagaaaagaaagacctgaaaaagaaaatggac
aaaaggagaacagagaaaatcaaagaagctatgacaaaagagaagcacttggtagaagag
gggaagttggagatcaacaaatcatatgtgaatgaagtggtacagaacatcaaaaggctg
gaggatgctcaggcaaaacgccaagagagactggtgaagcagcacaaagacatccagcag
caaattcttgatgagaaaccaaagctgcagggtgcagtggaggcggagtaccaggagaat
ttctgtctgttgccgggggagatccaggacttcctgcagaacaggaaagggggggtcaaa
ggtcacgtcgtgcctcggccctccaccccccatgacatactctctgaggaggaactagag
gaccggaggaagtga
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