Salvelinus namaycush (lake trout): 120023298
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Entry
120023298 CDS
T07522
Name
(RefSeq) latent-transforming growth factor beta-binding protein 2-like
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
snh04990
]
120023298
Domain-containing proteins not elsewhere classified [BR:
snh04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
120023298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
FXa_inhibition
EGF
EGF_3
hEGF
Plasmod_Pvs28
EGF_2
DUF7630
Motif
Other DBs
NCBI-GeneID:
120023298
NCBI-ProteinID:
XP_038823256
UniProt:
A0A8U0PCD8
LinkDB
All DBs
Position
Sna28:complement(26320343..26396853)
Genome browser
AA seq
1577 aa
AA seq
DB search
MSVFCQIPCLNGGRCIGRDQCWCPTNSTGKFCHLPAPPPARPTPSRKDGSLAGRNSSSHS
MYTLPLSNQQASLHPSMVNVHIQHPHEAEVQIHQVARVKPGQRPPAAEGAHSVQQRSQPG
NGIGNGHGHTRPHNRQNGYVGRCFQETVDGQCGKPLPGLTKQDDCCGSVGASWGLNKCTE
CPTKPAYAVIANGQVECPKGYKRMNMTHCQDINECLMNGICKNAECLNTRGSYRCTCKPG
YMLDPARSHCVSDKAVSDQRGMCYRSASVGTCSLPLAQHITKQICCCSRVGKAWGTACER
CPLPDTDHFKEICPAGHGYTYSRSDVQISLRQLEEEELRRTGVSWEAQNPSHPQLPQQPA
QPPQQLPHVPQTPQIPQYPYHRQPHQPQHPQHPHQPQHPQEIPHHPQTPQYPHQSHKPHH
PQHPQELPQTPQIPQYPHTPQQPQHPLHPDPDTQHPAGETPSQPQVDVVEKVTPDSPINL
GPESEGKDTASINVATQVTDIDKCSITPTICGHGLCVPVQTGYTCYCDPGYKLSALQTNC
IDVNECEGDPCGGKGRCVNTFGSYTCQCYSGYSQVITQNRKFCQDINECDMANKCQDGDC
VNTEGSYTCECKSGYAKSRKGQCEDVDECQGPSSCPSGRCVNTPGSFQCQACGPGFRAAS
GRCLDVDECLLPGACLHGRCVNLDGSHRCSCNPGYQSAPDGRACEDVDECSKADMCLGGV
CANTEGSFTCTRCKDGYRVSQDRQRCEDIDECQSGSVCANGICLNSEGSFSCITCPSGYS
VSLDGELCEDIDECELPTTCPRGTCTNTEGSFTCTTCGSGYRVTEDGLECDDVDECLVAN
VCPGQLCRNSPGSFSCSSCGTGFTLSEDGSHCQGVCPMGVCSNTEGSYSCMTCDLGFTLA
PNGLTCEDINECEDHGLCLAGQCTNNPGSYSCSCPPGLEMVDGTSCRDVDECQSGGICGD
GDCLNTEGSYLCICPDGYTTGTTDGIGCQDVDECSKDGVCSHGQCLNMDGSYICLCETGF
KYSADTADCEDIDECVNETICGDHGFCENTDGSYRCQCDQGYSNPPGDAGAHSCVDVNEC
EMSTALCGEALCENVDGSFLCICPSDNEEFDPITSQCRPQGEDAPPKPALPTEEQRKECY
YNLNDANFCDNVLSRNTTKQECCCTVGAGWGDDCEIHPCPVPGREEYDQLCPHGSGLLPQ
AVFSHSLEQQSFKDVDECKMFGPDICKNGRCSNNFSSYSCFCRTGFYYDNIRLECVDYDE
CLTEKACVDGVCVNTAGSFDCFCSPPLVLDSTRRRCVSVNTTEETHEPEEDIHLNICWQG
LVDERMCAQPLIGRRTTYTECCCLYGVAWSEQCAFCPRRDSDDYAAVCNLPRRGGSDSLR
ERPGYEYGPGVDGPEGPYVPPYWDNYGGGPITGPGGTYYNPEDTQGISLFTDNTNDYGSR
EGDIEPPLRVPVHRPREFQPHPVDSYNDRFDGFEGLRAEECGILNGCENGRCVRVREGYT
CDCFDGYELDLTKMACIDINECEDISDSVALCQNGACTNTEGSYKCTCLPGFQASAKPHE
CIPEVPVAGFRERVAGK
NT seq
4734 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtcttctgtcagatcccctgtctgaacggcgggcgctgcattggcagggaccag
tgctggtgcccaacaaactccacggggaagttctgccacctcccagccccccctcctgcc
cgacccacccccagcaggaaggacggcagcctggccggacgcaactcgtcctcccactcc
atgtacaccctgccgctgtccaatcaacaagcctctctacacccgtccatggtgaatgtc
cacatccagcacccccacgaggctgaggtgcagatccaccaggtagcccgggtcaagcct
ggccagagaccccccgcggctgagggggctcactctgtacagcagcgctcccaacctggc
aatggcatcggcaatgggcatgggcacaccagaccacacaaccggcagaacggatacgtg
gggaggtgcttccaagagaccgttgatggacagtgtgggaagcctcttccgggcctgacc
aaacaggatgactgctgtggaagtgtgggtgcctcatggggcctgaacaagtgcacagag
tgtccaaccaaaccagcgtatgcagtgattgcgaacgggcaagtggaatgccccaagggt
tacaaaaggatgaacatgactcattgtcaagacatcaacgagtgtttgatgaacgggatc
tgtaagaacgctgagtgtctgaataccagaggaagctacagatgcacctgtaaaccaggc
tacatgctggaccctgccaggagccactgtgtctcggacaaggctgtgtcggaccagagg
gggatgtgttaccgctcagcgtcagtggggacctgctctctgcctctcgctcagcacatt
accaaacagatctgctgctgcagccgtgtgggcaaggcctggggcacggcctgcgagagg
tgccctctgccagacacagaccatttcaaggagatctgtcccgctggccacggctacaca
tactcgcgctccgacgtgcagatctccctgagacagctggaggaagaggagctgaggagg
actggcgtttcctgggaggcccaaaaccctagccacccccaactgccccagcagccagct
cagcccccacagcagctgccccacgtcccacagaccccacagatcccacagtacccctac
caccgccaaccacatcaaccacagcatccacaacacccccaccaaccacaacacccacag
gagataccccaccacccccagaccccacagtaccctcatcaatcccacaaaccccaccat
ccacagcacccccaagagctcccccagacgccccagatcccccagtaccctcacaccccc
caacaaccacaacaccctctccatccagacccagacacccagcatccagctggggagacc
cccagccagcctcaagtagatgtggtagagaaagtgactcctgactctcccatcaacctg
gggcctgaatctgagggcaaggacacagcctccatcaatgtggccactcaggtcacagat
attgacaagtgctccatcactccaaccatatgtggccatgggctgtgcgtgccagtgcag
acaggctacacctgctactgtgaccccggctacaagctgagtgcactccagaccaactgc
atcgatgtaaatgagtgtgagggggacccttgtggagggaagggccgatgtgtgaacacc
tttggctcctacacctgccaatgctacagcggctacagccaggtcatcacccagaacagg
aagttctgccaggatataaatgagtgtgacatggccaacaagtgccaggatggtgactgt
gtcaacacggagggatcttacacctgtgaatgcaagagtggctacgccaagtccaggaaa
gggcagtgtgaagacgtagatgagtgccagggccccagctcgtgccccagtggaaggtgt
gtcaacaccccaggctccttccagtgccaggcctgtggccccgggttcagggctgccagc
gggagatgtctggatgtggatgagtgtctgctccctggagcctgcctccatggcaggtgt
gtcaatctggatggctcccacaggtgcagctgtaaccctggttaccaaagcgctcctgac
ggcagggcctgtgaagatgtggatgagtgctccaaggcagacatgtgtctgggaggggtg
tgtgccaacacagagggctccttcacctgcacccgctgtaaagacggatacagggtgtcc
caggacaggcagaggtgtgaggatattgatgagtgccagtctgggtctgtgtgtgctaac
gggatctgtctgaactctgagggctccttctcctgcatcacctgtccctcaggctacagc
gtctccctagacggagagctgtgtgaagatattgatgagtgtgagctgcccactacgtgc
cccaggggaacatgcaccaacactgagggttccttcacctgcaccacctgtgggtcaggc
tatagagtgactgaggatgggctggagtgtgatgatgtggatgagtgcttggtggctaac
gtgtgcccaggccagctgtgtaggaacagtcctggatccttctcctgcagcagctgtggg
actggctttaccctgtctgaggacggctcccactgccagggagtttgtcccatgggcgtt
tgcagcaacacagagggctcctactcctgtatgacctgtgaccttggcttcacgctggcg
cccaatgggctcacctgtgaagacatcaacgagtgtgaggaccacggtctgtgtctggca
ggacagtgtaccaacaaccctggttcatacagctgctcctgtcccccgggcctggagatg
gtggacgggacatcttgcagagatgtggatgagtgtcagtctggggggatctgtggagat
ggggactgtctaaacacagagggttcctacctctgcatctgccctgatggatacaccaca
ggcaccacagatggaattggctgccaagatgttgatgagtgcagcaaggatggcgtgtgc
tcccatggtcagtgtctaaacatggatggctcctacatctgcctttgtgagactggcttc
aagtactctgcagacacagccgactgtgaggatattgatgagtgtgtgaatgagaccatc
tgtggggaccatggcttctgtgagaacacagacggctcctaccgttgtcagtgtgaccag
ggctacagcaacccccctggtgatgccggggcccatagctgtgtggacgtgaacgagtgt
gagatgagcacggcgctgtgtggagaggccctgtgtgagaacgtggacggcagcttcctg
tgcatctgccccagcgacaatgaggaatttgatcccatcaccagccagtgccgcccgcag
ggtgaagatgctcctcctaagccagccttgcccactgaggaacagaggaaggagtgttac
tacaacctgaacgatgctaacttctgtgacaatgtgctgtctcgcaacaccaccaagcag
gagtgctgctgcacagtgggggccggctggggggacgactgtgagatccacccctgccca
gtcccagggagagaggagtatgaccagttgtgtccacatggaagtggtcttctgccccaa
gctgttttctcccacagcctggaacagcagagtttcaaagatgtggacgagtgtaagatg
tttgggccagatatctgtaagaatggccgttgctctaacaacttctcctcgtactcctgc
ttctgccgtacaggcttctactacgacaacatccggctggagtgtgtggattatgacgag
tgcctgacagagaaggcgtgtgtggatggggtgtgtgtgaacactgccggctctttcgac
tgtttctgcagtccccctctggttctggacagcacccgccgtcgctgcgtcagcgtcaac
accaccgaggagactcatgagcctgaggaggacatccacctgaacatctgctggcagggc
ctggtagatgagcgtatgtgtgcccagcccctcatcggcaggaggaccacctacacagag
tgctgctgtctctatggagtggcctggagcgaacagtgtgccttctgccccaggagggac
tctgatgactacgcagcagtgtgtaacctgccaaggagaggggggtctgacagtctacga
gagaggccaggctatgagtatggtcctggggttgatggtcctgaggggccctatgtcccc
ccctactgggacaactatggaggagggcccatcactgggcctgggggtacctactacaac
ccagaggacacccagggcatctccctgttcacagacaacaccaacgactatggctcccga
gagggagacatagagccgccactacgtgtccctgtccaccggccaagagagttccagcct
caccctgtagactcatacaatgaccgctttgatggcttcgagggcctgcgagcagaggag
tgtggcatcctgaacggctgtgagaatggccggtgtgtgcgcgtgagggaaggttacacc
tgtgactgctttgatggatacgagcttgacctcaccaaaatggcctgcatcgacataaac
gagtgtgaggatatcagtgacagcgtggcgctgtgtcagaatggggcctgtaccaacact
gaggggtcgtacaagtgcacctgcctgcctggcttccaggcctctgccaagccccatgaa
tgcatcccagaggtcccagtggctggctttagagagagagtggcagggaaatga
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