Salvelinus namaycush (lake trout): 120023397
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Entry
120023397 CDS
T07522
Name
(RefSeq) serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03015
mRNA surveillance pathway
snh04110
Cell cycle
snh04114
Oocyte meiosis
snh04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120023397
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120023397
04114 Oocyte meiosis
120023397
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
120023397
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
snh01009
]
120023397
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120023397
03036 Chromosome and associated proteins [BR:
snh03036
]
120023397
Protein phosphatases and associated proteins [BR:
snh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
120023397
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
120023397
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
120023397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Sec7-like_HUS
Motif
Other DBs
NCBI-GeneID:
120023397
NCBI-ProteinID:
XP_038823335
UniProt:
A0A8U0PE84
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All DBs
Position
Sna28:18887414..18972994
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AA seq
467 aa
AA seq
DB search
MSSAATTPPSVDKVDGFSRKSVRKAKQKRSQSSSQFRSQGKPIELTPLPLLKDVPAPEQP
ELFLKKLQQCCTVFDFMDTLSDLKMKEYKRSTLNELVDYVTVSRGYLTEQAYPEVVKMVS
YNIFRTLPPTDSNEFDPEEDEPTLEASWPHLQLVYEFFIRFLESQEFQPSIAKKYIDQKF
VLQLLELFDSEDPRERDYLKTVLHRIYGKFLGLRAFIRKQINNIFLRFVYETEHFNGVAE
LLEILGSIINGFALPLKAEHKQFLVKVLIPLHTVRSLSLFHAQLAYCIVQFLEKDPALTE
PVIRGLLKFWPKTCSQKEVMYLGELEEILDVIEPTQFVKIQEPLFKQISRCVSSPHFQVA
ERALYYWNNEYIMSLIEENSSVILPIMFASLYRISKEHWNPAIVALVYNVLKAFMEMNST
LFDELTATYKSDRQREKEKEKEREELWKKLEDLELKRNLRRDGIIPT
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcggcagcaaccacacctccatctgtggacaaagtggacggattttcacggaag
tctgtcaggaaggccaagcagaagcgatcgcagagttcgtcccaattccggtctcagggc
aaacccatcgagctcacgcccctgcccctgctcaaggacgtgccagcgccggagcagccg
gagctgttcctgaagaagctgcaacagtgctgtactgtttttgacttcatggacacgctg
tctgacctaaagatgaaagagtacaagcgctccacgctcaacgaactggtggactatgtc
accgtcagcaggggctacctgacagaacaggcctacccggaggttgtcaaaatggtgtct
tacaacatattccggacccttccgcccacggacagtaatgagtttgacccagaggaggat
gaacccacactcgaggcctcatggccgcacttacagctggtgtatgagttcttcatacga
ttcttggagagtcaagaattccagcccagcattgccaaaaagtacatagaccagaaattt
gttctacagctcttggagctctttgacagtgaggaccctcgggagagagattacctgaaa
acagtcttacacagaatctatgggaaattcctggggctgagggcttttatacgaaaacag
ataaataatatttttctacgttttgtttatgagactgagcactttaacggggttgctgag
ttgctggagatcttgggaagcataatcaatggttttgccctgccgctcaaagcagagcac
aaacagtttctggtcaaagtgttgatccccctccacactgtcaggagtctgtccctcttc
catgcacagttggcgtattgcattgtacagttcctagagaaagacccagcgttaacagaa
ccagtcatcaggggcttactgaagttctggccaaaaacctgcagtcaaaaagaggttatg
tacctgggggagctggaggagatcctagacgtgatcgagccgacacagttcgtcaagatc
caggagccgcttttcaaacagatctccagatgcgtatccagcccacacttccaggtggca
gaaagggccctgtactactggaacaatgagtacatcatgagtctgattgaggagaactcc
agcgttatcttacccatcatgttcgccagcctgtacaggatctccaaagaacactggaac
ccggcgatagtggcgttggtgtacaacgtactgaaagccttcatggagatgaacagtacc
ttgtttgatgagctcacagctacttacaagtcagaccgccagcgtgagaaggagaaggag
aaggagagggaggagctttggaagaagttagaggacctggagctgaagaggaaccttagg
cgtgacgggataattcccacttaa
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