Salvelinus namaycush (lake trout): 120023420
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Entry
120023420 CDS
T07522
Name
(RefSeq) hepatocyte nuclear factor 3-alpha-like
KO
K09387
forkhead box protein A1, hepatocyte nuclear factor 3-alpha
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120023420
Transcription factors [BR:
snh03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix tissue-specific regulators
120023420
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Forkhead
Forkhead_N
HNF_C
Motif
Other DBs
NCBI-GeneID:
120023420
NCBI-ProteinID:
XP_038823366
UniProt:
A0A8U0TPT8
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Position
Sna28:12289805..12292951
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AA seq
433 aa
AA seq
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MLGTVKMEGHETPDWSSYYNDAQEVYSPMANSGMNAGLSSMNSMNSYMSMSTSGNMTSGS
FNMSYANPGLGAGISPGTMAGMPPSTSMNGMCGGVSSMGTALSPSNMGAMSAQQASMNAL
NPYASMSPTMSHMSYNQSNLNRARDNKSFRRSYPHAKPPYSYISLITMAIQQAPSKMLTL
SEIYQWIMDLFPYYRQNQQRWQNSIRHSLSFNDCFIKVSRSPDKPGKGSYWALHPDSGNM
FENGCYLRRQKRFKCENRKLSSSKGDGRKDQSGSGSPSSDNSKTGHVDPNSLSTCNQSSS
PHIMDRRSSSSASELKSSGPPLHPVASSVTSLSSLPLPPHSMAHESQLHLKGDPHYSFNH
PFSINNLMSSSEQQHKLDLKAYEQALQYSSYGSGMSSSLPLGSASMVGRAMDPSAIEASY
YQGVYSRPVLNTS
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgttgggaacagtgaaaatggaaggtcacgaaacaccagattggagcagctattacaat
gacgcacaagaggtatattcacccatggcaaacagcggcatgaatgcaggactgagttcc
atgaacagtatgaacagttacatgagtatgtctaccagtggaaatatgacctccggttct
ttcaacatgtcctacgcgaaccctggcctgggagccggaataagccccggtacaatggca
gggatgcctccgagcacgtccatgaatggaatgtgcggcggggtatcgtcaatgggcact
gcccttagcccctcgaacatgggcgcaatgtcggctcagcaggcttccatgaacgctctg
aatccatacgccagcatgagccctacaatgagccacatgtcctataatcagtccaacctg
aaccgagcaagggacaacaagtcgttcaggagaagctacccgcacgcaaagcctccgtat
tcatacatatccctgataaccatggccattcagcaagcaccaagcaagatgctcacgctt
agcgaaatctaccaatggataatggacctatttccatactacagacagaaccaacagagg
tggcagaactctattcgccattccttgtcttttaatgattgcttcatcaaagtgtctagg
tcaccggataagccaggcaaaggctcatactgggccctgcacccagattctggaaatatg
ttcgagaacggttgttatctccgcagacaaaagcgctttaaatgcgaaaatagaaagcta
tcttcaagtaaaggagatggaaggaaagaccagtctggttctgggtcaccttcgagcgac
aacagcaagactggacatgtggaccccaactccctctccacctgcaaccagtcctccagc
cctcacatcatggaccgcaggagcagtagcagcgcctctgaactaaagagcagcgggcca
cctctccaccctgtggccagctccgtcacttccctgtcctctctccctttacctccgcac
tcgatggcgcacgagtcccagctgcacctaaaaggggatccccattactcattcaaccac
cccttttcaataaataatttaatgtcatcctcagagcaacagcacaaactggacttgaaa
gcctacgagcaagctttgcaatactcctcctacggctcaggtatgtcctccagtctaccc
ctcggcagcgcgtccatggtaggcagagccatggacccatccgcaatagaggcgtcatac
tatcaaggtgtgtattccagaccggtcctcaacacttcttag
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