Salvelinus namaycush (lake trout): 120023501
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Entry
120023501 CDS
T07522
Name
(RefSeq) transcriptional repressor protein YY1-like
KO
K09201
transcription factor YY
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03082
ATP-dependent chromatin remodeling
snh03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120023501
03083 Polycomb repressive complex
120023501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120023501
03036 Chromosome and associated proteins [BR:
snh03036
]
120023501
03029 Mitochondrial biogenesis [BR:
snh03029
]
120023501
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
120023501
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
120023501
Mitochondrial biogenesis [BR:
snh03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
120023501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
C2H2_ASCIZ
TFIIIA_zf-C2H2
DUF4114
Raffinose_syn
IBR
zf-C2H2_ZN142
Motif
Other DBs
NCBI-GeneID:
120023501
NCBI-ProteinID:
XP_038823456
UniProt:
A0A8U0TPW9
LinkDB
All DBs
Position
Sna28:45960411..45965838
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AA seq
355 aa
AA seq
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MASCDTLYIETDGSEMPAEIVELHEIEVETIETTVVGEDDDEQPMIALQPLDSDDPHSMH
HHHQEVILVQTREEVVGEDDSDMHGDDDYEDQILIPLPVPAAEEEYIEQTLVTVAGKSSG
RMKKGGSVKRNKKSYLGAPEASGRKWEQKQVQIKTLEGEFSVTMWASDDKKEIDHDTMVE
EHVIGESSPPDYSEYMTGKKLPPGGIPGIDLSDPKQLAEFARMKPRKIKEDDSPRTIACP
HKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEG
CGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggcatcatgcgataccctgtacatcgaaacggacggctcagagatgccagctgagata
gtggaactccatgaaatcgaagtggagaccatagagacaacagttgttggagaggacgac
gatgaacagcccatgatcgctttacagccccttgactcagatgatccacactcaatgcat
caccatcatcaggaggtaatattagtgcaaacgagagaagaggtggttggtgaagatgac
tcggacatgcacggggacgatgattacgaggaccaaattcttatacctctcccagtccct
gccgctgaagaggaatatatcgaacaaactctggtgactgtcgccgggaagagttcgggg
cggatgaagaaggggggaagcgtgaagagaaataaaaagagttacttgggtgcaccggag
gccagtggtagaaaatgggaacagaaacaagtccagataaagactttggaaggagagttt
tcggtgaccatgtgggcatcggatgacaagaaggaaattgaccatgacactatggtggag
gagcatgtcatcggggagagttcccctcccgattactccgagtacatgacagggaagaag
ctcccgcctgggggcatcccagggattgacctgtcagaccctaaacaactggcagagttc
gccaggatgaagccacggaaaataaaggaggacgactctcccaggacgatagcctgcccc
cacaaagggtgcactaaaatgttcagggataactcggcgatgaggaagcatttgcacacc
cacggaccgcgtgttcacgtctgcgccgaatgtggaaaggcctttgttgaaagctctaaa
ctgaagaggcatcaacttgttcataccggagagaagcctttccagtgcacgtttgagggc
tgcggaaagcggttctctttggactttaacttacgcacgcacgtgcggattcacactgga
gaccgaccctacgtctgtccgttcgacggctgcaacaagaagtttgcccaatctaccaac
ctcaagtctcacatcctcacacatgctaaagctaaaaacaatcagtga
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