Salvelinus namaycush (lake trout): 120023519
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Entry
120023519 CDS
T07522
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-2-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04080
Neuroactive ligand-receptor interaction
snh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120023519
04082 Neuroactive ligand signaling
120023519
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120023519
Ion channels [BR:
snh04040
]
Ligand-gated channels
GABA-A
120023519
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
120023519
NCBI-ProteinID:
XP_038823471
UniProt:
A0A8U0TPX4
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Position
Sna28:complement(20633075..20658828)
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AA seq
461 aa
AA seq
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MRERWDLSYYLAVFFSLMVLWQSRSIVQSSAYASEAFKNNITLFTRILDRLLDGYDNRLR
PGLGDRVTEVKTDIYVTSFGPVSDTDMEYTVDVFFRQSWIDERLKFNGPMNILRLNNLMA
SKIWTPDTFFHNGKKSVAHNMTMPNKLLRIMEDGTLLYTMRLTVQAECPMHLEDFPMDSH
SCPLKFGSYAYTMAEVTYIWTRNASASVEVALDGSRLNQYHLQGQTVGTETIKSSTGEYT
VMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSI
SARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKSVVNVKQKKEA
STMKKNNAYAVAVANYAPNVTKDQSGLPTISKSATSDPNKAKPEVKPEVKPEQNKKTFNS
VSKIDRMSRIMFPVLFGGFNLVYWATYLNREPVIKDMVPSK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgagagagcgatgggacttatcgtattatctagcggtgttcttctcgttgatggtactg
tggcagtcaagatcaatagtgcaatcgtctgcatatgcttcagaggccttcaaaaacaac
atcactctgtttacccggatcttggaccgccttctggatggctatgacaaccgattacga
cctggacttggagatcgggtgacggaggtgaagactgatatttatgtcacaagtttcggt
ccagtgtcagacacagacatggagtacactgtggacgtgttcttccgtcagagctggatt
gacgagcggctgaagttcaacggtcccatgaacatcctgcggctgaacaacctgatggcc
agtaagatctggacgcccgacacctttttccacaacgggaagaaatctgtggctcacaac
atgaccatgcccaacaaactgctccggatcatggaggatggaacactgctgtacactatg
aggttaacggtccaggcagaatgtcccatgcacctcgaagatttccccatggattcccac
tcctgtccactgaagtttggcagctatgcctacacaatggccgaggtgacgtacatttgg
acccgaaacgcatcggcgtcagtggaggtagcactagatggatccagactgaaccagtat
caccttcagggacaaactgtggggacagagaccattaaatcaagcactggtgaatacact
gtcatgacggcccacttccacctgaagaggaagattggctactttgtgatccagacctac
ctgccctgcatcatgaccgtcatcctctcccaggtctccttctggctcaaccgagagtct
gtacccgccagaactgtctttggtgtgaccactgtgctcactatgacgactctcagtatc
agtgcccgtaactctctgccgaaggtggcctacgccacggccatggattggttcattgca
gtgtgctacgccttcgtgttctctgccctcatcgagtttgctaccgtcaactacttcacc
aaaagaggctgggcctgggatggcaaaagtgtggtcaacgtcaagcagaagaaggaggcg
tccaccatgaagaagaacaacgcctatgccgttgctgtggcaaactatgccccgaacgtc
accaaggaccaaagtggtctgcccaccatctccaagagcgccacctctgaccccaacaag
gccaagccagaggtcaagccagaggtcaagccagagcagaacaagaagaccttcaacagc
gtcagcaaaattgaccgtatgtcccggattatgttccccgtgctcttcggtggtttcaac
ctggtctactgggccacctacctgaacagagaaccagtcataaaggacatggtcccgtcc
aaatga
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